Amborella trichopoda: 18436833
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Entry
18436833 CDS
T02990
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 27 isoform X1
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
atr01002
]
18436833
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atr04131
]
18436833
04121 Ubiquitin system [BR:
atr04121
]
18436833
Enzymes [BR:
atr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
18436833
Peptidases and inhibitors [BR:
atr01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
18436833
Membrane trafficking [BR:
atr04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
18436833
Ubiquitin system [BR:
atr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
18436833
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
Motif
Other DBs
NCBI-GeneID:
18436833
NCBI-ProteinID:
XP_006847118
UniProt:
W1PLS7
LinkDB
All DBs
Position
Unknown
AA seq
594 aa
AA seq
DB search
MKTIKEVKWRNAEKFNIHRLFDMRKHGDRISFPFKGVLLGQVFVFTAGIFGAGLVGWFLS
LKDGNFPWMNMLGRFMPGRKHSLDKLCFVPGLQNMGNNCFLNVILQALASCCRFHAFLQN
LIHADDSILEKRLEDMPLTASLFTLLEELSALRAERTISSPLKVMHAMSLYVSSFDLTRQ
QDAAEALLYLLSALKEEYIESCEPDGGSLADICSFSHRLHLSSKERESHHDRQRWQENFR
GPFDGTLGSFLGCKRCSFQLSIDFEFFHCLPLSPVLDMDGEIVVGCTIDDCLRKLIAAEQ
IENYHCNHCFHMAAIKYFGLKMDGNEALIHKLRSCTNYDECKCKDILLQKGVPCFTNFSC
VMKQLSIGRCPEILCIHLQRASVDEYGNSVKLLGHISFPPILHFFPYTAAGVSLGSEIPE
RNMVLDLKHRMCQQTPVVPCLDFHSGRLEGQAPYHNFSDVEDQTSMAAFYESGVDMAICE
PFSHSYCTNASGSGDKGGGNGDSIAPKGYFYSLTSVVEHHGRPGSGHYTVYRRALVGSDE
EALIHGQCGDEGKQLKKAEMYWYGISDSDVLRVPIERVLASEASLLFYEKTSIS
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgaagacaattaaagaagtgaagtggagaaatgcagagaaattcaatatacatcgactc
tttgacatgcgtaaacatggtgatcgaatatcatttcctttcaagggagtattgcttggt
caagttttcgtgtttactgctggaatttttggtgctggtttagttgggtggtttttgtct
ctgaaagatggaaattttccatggatgaatatgttgggcagatttatgcctgggaggaaa
cattctttggataagttatgctttgtaccagggctgcaaaatatgggcaacaattgcttc
ttaaatgtaattttacaggccttggctagttgctgtcgcttccatgctttcctacaaaat
ctgatacatgcggatgattcaatactggagaaaagactagaagacatgcctctaactgca
tcattattcacattgttggaagagctatctgcccttcgagcagaaagaacgatttctagt
ccactaaaggtgatgcacgccatgagcctttatgtttcaagttttgacttaacaagacag
caggatgctgcagaagctctcctgtatctattatctgctttgaaagaggaatatatcgaa
agttgcgaaccagacggtggttccctggcagatatatgttctttttctcatcgtttacat
ttgagctcaaaagagagggagagccaccatgatcggcaaaggtggcaggaaaatttccgt
ggtccctttgatggaacccttggcagttttttgggttgtaaaagatgttcatttcagctt
tctattgatttcgagtttttccactgcttgccgctctcacctgtgctggatatggatggg
gaaattgtggtgggatgtaccattgatgactgccttaggaagcttattgctgcagaacag
atagaaaattaccattgcaaccattgctttcatatggctgctataaaatattttggtctc
aaaatggatgggaacgaggcattgatacataaactaaggagttgcactaattacgatgag
tgtaaatgcaaagatattcttctacagaagggggtaccttgttttaccaatttttcatgt
gtgatgaagcaattgagcattggacgttgcccagagattttgtgcatccatttgcaacgt
gcatcagtggatgagtatggcaattcagtcaaactgttgggccacatttcttttcctcct
atcttgcacttcttcccctacacagctgcaggtgtgagcctgggatcagaaatccctgaa
agaaatatggtacttgatctcaagcatcggatgtgccagcaaactccagtcgttccatgc
ttggatttccattctgggcggttagaaggccaagctccgtatcataatttcagtgatgtt
gaagaccaaacatccatggctgctttttatgaaagtggtgtggatatggctatttgtgaa
ccatttagccattcctattgtaccaatgcttcaggttcaggagataagggaggcggaaat
ggtgattctattgctccaaaaggatacttttacagtcttacttcagtggtggagcaccat
ggaaggccagggagtggtcattatacagtatatcggagagctttggttggctcagatgaa
gaagctctcattcatgggcagtgtggagatgaagggaagcaactgaagaaagctgagatg
tattggtatggtatatcagactctgatgtcctgagagtgccgatcgagagagttttggcg
tcagaagcgagcttacttttctatgagaagacatctatatcataa
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integrated database retrieval system
