Amborella trichopoda: 18436847
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Entry
18436847 CDS
T02990
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atr03041
]
18436847
Spliceosome [BR:
atr03041
]
Common components
Common spliceosomal components
General mRNP proteins
18436847
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
Motif
Other DBs
NCBI-GeneID:
18436847
NCBI-ProteinID:
XP_020524445
LinkDB
All DBs
Position
Unknown
AA seq
661 aa
AA seq
DB search
MVFHMLLYWLVSLMDFDEYDYLEKTVENPEGYKDSSTVDDHRKSSKRGADADEPTVENRT
KRAKSEEESGDRSKHRSSKEIYERNGRSRDHDREREKVRERDRDRDRDRDGERDREKERE
RDREKERERDREKERERDREKERERDREKERERDKERERVRDKERERDREKDRERDREKD
REKDRERERERERERERDREKEKEKEKEKEKERERERDREREQERSRRSSSRSGRYERER
DRGKSRDMEEREREREREREKERELELREREMRRLKEKKEVVEPEADPERDQRTVFAYQM
PLKANERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGQLLLG
QPVMVKPSEAEKNLVQSTASAGGAAGLAGVARKLYVGNLHFNMTEDQLRQVFEPFGPVEL
VQLPLDLETGQCKGFGFVQFAQLEHAKAAQSLNGKLEIAGRVIKVSAVTDHVGGQDVVAT
AGDLDDDDGGGLSLNARSRALLMQKLDRTGTATSIAASLPTPVLNGPVLSQPTVGLPMMG
PTGVLGALSATAVTAPVVDSLGVPSECLLLKNMFDPSTETDPEFDLEIKEQVADECSRFG
SVKHIHVDKYNPGGHVYLRFDSAASAINAQRGLHGRWFAQKMISATFIPPQQYEAKFSGG
I
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggtgttccatatgttactatactggttggtcagcttgatggatttcgacgagtatgat
tatttagagaaaacggttgaaaatcccgagggttacaaggattcttctactgttgatgat
catagaaaaagctcaaagcgtggggctgatgcagatgaacccactgtggagaacaggacc
aagagagcgaaatctgaggaagaaagtggagatagatcgaagcatagaagcagcaaagag
atttatgagagaaatgggaggtcaagggatcatgacagagagagagagaaagtacgggag
cgtgaccgtgatcgtgatcgtgaccgtgatggtgaaagggatagggagaaggagagagaa
agggatagggagaaggagagagaaagggatagggagaaggagagagaaagggatagggag
aaggagagagaaagagatagggagaaggagagagaaagagataaggagagagaaagggtt
agggataaggagagagaaagggatagggaaaaggaccgagaaagggatagggaaaaggac
agagaaaaggatagggaaagagaaagagaaagagaaagggaaagagaaagggacagggaa
aaggagaaggagaaagagaaggagaaggagaaggagagagaaagggagagggatcgggaa
agggaacaggagaggtcgcgtaggagcagcagtcggtcgggaaggtatgagagggagagg
gaccgaggaaagagtagagacatggaggaaagagaaagagagagagagagggaaagagaa
aaagaaagggagctcgagttaagggagagagagatgaggcgtctcaaagaaaagaaagaa
gtggtggaaccagaagctgatccagagcgcgatcagaggactgtctttgcttaccagatg
ccattgaaggcgaatgagagggatgtatatgagtttttctcaagggcaggcaaggtaagg
gatgttcggctgattatggaccggaactccagacgctcaaaaggagttgggtatatcgag
ttttatgacgccatgtcagttcctatggcaattgctctttctggtcagctgcttcttggt
cagcctgtaatggttaagccatctgaggccgaaaagaatcttgtacaatcaacagcttct
gctgggggagcagctggtcttgctggggtggccagaaaactttatgtcgggaatctacac
ttcaacatgactgaggatcagctccgacaggtatttgaaccttttggtcccgtggagctt
gttcaattaccccttgatcttgagacagggcagtgcaaaggttttgggtttgttcagttt
gctcaactggagcatgcaaaagctgctcaaagtttgaatgggaagctggaaattgctggc
agggttatcaaggtgtctgctgtgacagatcatgttggagggcaggatgtagtggcaaca
gcaggtgacctcgatgatgatgatggtggtggcctttctctcaatgctcgctccagagcc
ctactcatgcagaaattggatcgtactggcactgccacgagtatagcggcttctctccca
acacctgtactgaatggtccagttctaagtcaaccgactgtaggccttccaatgatggga
cctactggtgttttaggtgctctctctgcaacagcagtcactgctcctgtggttgactcc
cttggggtccctagcgagtgccttttacttaagaatatgtttgatccatccactgagact
gatccagaatttgatttggagataaaggagcaagttgctgatgagtgttcgagatttggc
tccgtgaagcatatccatgtggacaaatacaatccaggaggccatgtatatttgcggttt
gacagtgcagcttcagcaattaatgcacaacgtggcttgcatggccgatggtttgcacag
aaaatgatctccgctacattcatcccccctcagcaatacgaggcaaagttttcgggaggc
atttaa
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