Amborella trichopoda: 18437024
Help
Entry
18437024 CDS
T02990
Name
(RefSeq) trichohyalin isoform X1
Organism
atr
Amborella trichopoda
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fib_alpha
ERM_helical
CENP-F_leu_zip
YfkB
Crescentin
Motif
Other DBs
NCBI-GeneID:
18437024
NCBI-ProteinID:
XP_006847307
UniProt:
W1PLH5
LinkDB
All DBs
Position
Unknown
AA seq
1530 aa
AA seq
DB search
MSESERELEENFEGRHEKNSQHSSGRKSNGSSSGSSSSDSDSGTKPYKEINRKLEQEKKA
LNEEIKKLMDKISSMTEEEEKMKEDVQMKEVRIRELEEQNAGLVSEHRKEKQKMEGSFSE
DLGSKDNQIQKLEDQLVGLRESLSNHEDAQKIMAKKEEKWVEDLESKGKRVMDLEDQLAR
ALSNHELEKSKMSTEREELMKDYKSKGSRILELEVKVAGLHQTISRHESEEVKRTEEEKK
IREELFSMGNQILEFRDRLVAQTETLETYKQQELKMVEYQWKLRQDLESKGNRILELEDK
LAGLYETLSKHESEGLRMTEERQIMKEELELKGCRILELEEQLADLNEALAKHETEGLKM
SEERERMKEELQLKGSWSLELEDKLASLNEANANHESEKLRVTKERDKIREDLELNQSRI
LELGDKLTSLNETLSNHKKEQLEMARKFKADLESMDMQNVILRNEIATLIMKHKKEGEEV
AKRIKIMEYDLVLKTRYITEVDKQLEVLNETLSKHKELVETEQKLRIELDSKVTRILDLE
GQLASLSKTIEISKSENEKLKTEVAEKETIVTDLSLKLDTRHGSIKELETLVEQKEAKIE
ELCGTIDMFKCKNEELETQLIERQKNVSNLITKLDTAHGSLKDLERSVAKREAETERLGK
TIEISKLEQEKLKAELAQRENHVSDLRLELDNRHASIKDLERRVEEREAEIIRLRNELGV
CSSKLQEKEELLGTIEANTTILQSAKEEQETKAIELGEGAKRLREENVRLQDSTKKLEAE
ILGLSDELQFMKEEVGKLREEREYLSQKLQGVEEDLSESVREREEAEALMDGERKTMAQE
CKLLNERELECEGNIGELEKEVAKLKMEVGKLQEVRKQLESILEGMEEQLRERDRVKEEA
KDAWDRERKSMEQERVLYIEEVATYDGMIVEWEKKVEQANDEVGKLQQECKQLYLKLQEK
EELVGMIEANTRILQSAKEEQETKAIELGEEAKRLREENVRLQDSAKKLEAEILGLSEEF
QLMKEEVGKLREEREHLSQKLQGVEEDLRESVREREKAEALMDGERKTMAQECELLKKRE
LECEGNIGELEEEVVELKMEVGKLQEVRKQLESMLEGMEQQLRERDRVNEEAKDAWDRDR
KSMEQERVLYIEEVATHDGMIVEWEKKVEQANDEVGKFQLECKQLHQKLQEKEELLGMIE
VNTRILQSAKKEQETKAIELGEEAKRLREENVRLQDSTKKLEAEILGLSEELQLMKEEVG
KLREEREHSSQKLQALEEDLRESVREREKAKALMDGERKTMTQECELLKKRVLECEGNIG
ELEKEVAELKMEVGKLQEVHQQLESMLEGMEEQLRERDRVNEEAKDAWGRERKSMEEERV
LYIEEVATHDGMIADLEKIVEQANDDVGKLQQERKQLHQKIQCLEEEMRGKDREREKANT
AIAREIKAREAMERELKELEEKVEGLKEVGLAKDDQKREAIRQLCLAIEHHRDNYNHMRD
LLLARVTRVSWGRDPLLARITRVTSGPASS
NT seq
4593 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaatctgaaagggagctggaagaaaacttcgaaggcaggcatgagaagaactcc
cagcactcctctggcagaaagagcaatggcagctcatctggctctagttcttcagattca
gactcggggaccaaaccttacaaggaaattaatcgcaaattggaacaggagaagaaagcc
ctcaacgaggagataaagaaattaatggataaaatttcttcaatgacagaggaagaagag
aaaatgaaagaagatgtacaaatgaaagaggtccgaattcgtgaactagaagaacagaat
gcgggtcttgtctcagagcacagaaaggaaaagcagaagatggagggaagtttcagtgaa
gatttgggctccaaagataatcaaatccagaaactggaagaccaacttgtgggccttcgt
gaatctctctctaaccacgaggatgcacagaagatcatggcgaagaaagaagaaaaatgg
gttgaagatttagagtccaaagggaaacgggtcatggatctagaagaccagcttgcaagg
gccctctcaaatcatgaacttgaaaagtcaaagatgagtacggagagagaagagttgatg
aaagattataaatctaaggggagcaggatactggaactggaagtcaaggttgctggcctc
catcagacaatctcgaggcatgaaagcgaagaagtgaagaggacagaagaagaaaagaaa
ataagagaagaattattctcgatggggaaccagatcctagaatttagagaccgacttgtt
gcccagacagagactcttgaaacgtacaaacaacaagaactgaagatggttgagtaccag
tggaaactgagacaagatctggagtcaaaggggaaccggatccttgaattggaagacaag
cttgctggtttatatgaaactctctcaaagcatgaatctgaaggactgaggatgactgag
gagagacagataatgaaagaagagctagagttaaaaggatgccggatccttgaattagag
gagcagcttgcagatcttaatgaagcccttgcaaagcatgaaactgaagggctgaagatg
agtgaggagagagagagaatgaaagaagaactacagttgaaagggagctggagccttgaa
ttagaagacaagcttgccagcctaaatgaagcaaatgcaaatcatgaaagcgaaaaattg
agggttacaaaggagagagataaaataagagaagaccttgaattgaatcagagccggata
ctagaactaggagacaaactcacaagtctaaacgaaaccctctcaaatcacaagaaagag
cagctcgagatggcaaggaaatttaaagcagatttggaatcgatggacatgcagaatgtg
atactgagaaatgaaatagcaacattgattatgaagcataagaaggaaggagaagaggtt
gcaaagaggataaagataatggagtatgatttagtgttgaagacaaggtatatcacagaa
gtagataaacagcttgaagttctgaatgagaccctatccaagcacaaggaattggtcgaa
acagaacagaaactaagaattgaactcgactccaaggtgacgcggatcctagaccttgaa
gggcagttagctagcctatctaaaaccattgagatctctaaaagcgagaatgagaaactc
aagacagaagttgcagaaaaggaaacaattgtaacagatctgagcctcaaactggacact
agacatggctcgatcaaagaattggagacacttgtggaacagaaagaagctaagatagag
gagctatgtgggactattgatatgtttaagtgcaagaatgaggaactcgagacacaattg
atagaaagacaaaaaaatgtttccaatttgattactaaactggacactgcacatggctca
ttaaaagatttggagagaagtgtggctaagagagaagctgagacagagaggctaggtaaa
accatcgagatctctaagctcgagcaggagaaactcaaggcagaattggcgcaaagagaa
aaccatgtatcagatctgaggcttgagttggataatagacatgcctcaatcaaagactta
gagagaagagtagaagagagagaagctgagataatcaggctcagaaatgagcttggggtg
tgttctagtaagcttcaagagaaagaggaactacttggaactatagaggcgaacactaca
atattacagagtgccaaggaggagcaggaaaccaaagcaattgaacttggagagggggct
aagaggctacgagaagagaatgttagattacaagacagcaccaagaagctcgaagcagag
atcttggggttatctgatgaacttcaattcatgaaagaggaggttgggaagttaagagag
gagcgtgagtacttaagtcagaaactccaaggggtggaagaggacttgagtgaaagtgtt
cgagagagagaggaagcagaagctttgatggatggagagagaaagactatggcacaagag
tgtaagctgctgaatgagagggagttggaatgcgaaggaaacattggggaattggagaag
gaggttgcgaagttgaaaatggaggtggggaagttacaggaggtgcgcaagcaattggaa
tcgattcttgaaggcatggaagagcaactgagggagagggatcgagtgaaggaggaagct
aaagatgcatgggatagagagagaaagtctatggagcaagagagagtgctgtacatcgag
gaggttgcaacatatgacgggatgattgtggaatgggagaagaaagtggagcaggccaat
gatgaggttgggaagttacaacaggagtgcaagcaattgtacctgaagcttcaagagaaa
gaggaactagttggaatgatagaggcgaacactagaatattacagagtgccaaggaggag
caggaaaccaaagcaattgaacttggagaggaggctaagaggctacgagaagagaatgtt
agattacaagacagcgccaagaagctggaagcagagatcttggggttatctgaagaattt
caactcatgaaagaggaggttgggaagttaagagaggagcgtgagcacttaagtcagaaa
ctccaaggggtggaagaggacttgagggaaagtgttcgagagagagagaaagcagaagct
ttgatggatggagagagaaaaactatggcacaagagtgtgagctgctgaagaagagggag
ttggaatgcgagggaaacattggggaattagaggaggaggttgtggagttgaaaatggag
gtggggaagttacaggaggtgcgcaagcaattggaatcgatgcttgaaggcatggaacag
caactgagggagagggatcgagtgaacgaggaagctaaagatgcatgggatagagacaga
aagtctatggagcaagagagagtgctgtacatcgaggaggttgcaacacatgacgggatg
attgtggaatgggaaaagaaggtggagcaggccaatgatgaggttgggaagtttcaactg
gagtgcaagcaattacaccagaagcttcaagagaaagaggaactacttggaatgatagag
gtgaacactagaatattacagagtgccaagaaagagcaggaaaccaaagcaattgaactt
ggagaggaggctaagaggctacgagaagagaatgttagattacaagacagcaccaagaag
ctcgaagcagagatcttggggttatctgaagaacttcaacttatgaaagaggaggttggg
aagttgagagaggagcgcgagcactcaagtcagaaactccaagcgttggaagaggacttg
agggaaagtgtgagagagagagagaaagcaaaagctttaatggatggagagagaaagact
atgacacaagagtgtgagctgctgaagaagagggtgttggaatgcgagggaaacattggg
gaattggagaaggaggttgcggagttgaaaatggaggtggggaagttacaggaggtgcac
cagcaattggaatcgatgcttgaaggcatggaagagcaactaagggagagggatcgagtg
aacgaggaagctaaagatgcatggggtagagagagaaagtctatggaggaagagagagtg
ctgtacatcgaggaggttgcaacacacgatgggatgattgcggacttagagaagattgtg
gagcaggccaatgatgatgttgggaagttacaacaggagcgcaagcaattgcaccagaag
attcaatgcctggaagaagagatgaggggtaaggatagagagagagagaaagcaaacact
gcaattgctagagagataaaggcgagagaggctatggagagagagctcaaggagttggag
gagaaggttgagggattgaaagaggtagggttggcgaaggatgaccagaaacgagaagcg
ataaggcagctctgtctcgcgattgaacaccaccgggacaactataaccatatgagggac
ctgttattggcccgagtcactagggtgtcctgggggagggacccgttattggcacgaatc
actagggtgacctcggggcccgcctcctcttga
DBGET
integrated database retrieval system
