Amborella trichopoda: 18437067
Help
Entry
18437067 CDS
T02990
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
KO
K03093
RNA polymerase sigma-I factor
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atr03021
]
18437067
Transcription machinery [BR:
atr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
18437067
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
GerE
Motif
Other DBs
NCBI-GeneID:
18437067
NCBI-ProteinID:
XP_020524640
LinkDB
All DBs
Position
Unknown
AA seq
520 aa
AA seq
DB search
MGVMTVPGSASSFGVGIRFLNLPLQRRTLRKPTSFLAFKGSPHSQKTKKSSIAIAPESLP
TDTNVNQRKLISLTSTRKVKPKKTVQAVTMDNTAPCATVDLDYNEAAAALENIYKLSPAT
ISEDSDTEATGQKKRCTRKRKLERNFTGLEGEVTEKSDRRVVRSLRRKSKRLSLEKRVAL
RRRRRRDKSCSDEGKGELYSEDVESLVKGYSVATDLVSLDWKKMKIPPVLPSSQHAWLFK
LMQPLKAILKVKEDLTMDLGREAIEGEVAAATNMCVAEMRRHVEVGQAARNKLIKVLLSF
HIIPCTHVKLYNKYCTCHGWFCLFYEVESSPHALVLKLNYKYLLEKKPLFPMSLLNSTQT
ASQMCLMVRQVIQRAKLEFLFEHGWLPTDEEIMEKVGISEEKYHDVLRASKPVFSLNAKH
VTTQEELVNGVMDMDGVTGDKRKPAALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRT
LSEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYIV
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgggagttatgacagttccaggctctgcttcctcatttggtgttggaataagattctta
aaccttccattgcaaagaagaaccctaagaaaacctacttcttttcttgcattcaaagga
tctccacattcccaaaagaccaagaaatcctcgattgctattgcaccagaatctttaccc
actgatacaaatgtaaaccagaggaaactcatatcactaacatcaactaggaaagtcaaa
cccaagaaaactgttcaagctgttaccatggataacactgctccttgtgcgactgttgat
cttgattacaatgaggcggcagctgcgctagagaacatatacaagctcagccctgccacc
atttctgaagactcagacactgaggctacaggccagaagaaaagatgcactagaaagaga
aagttagagagaaattttactggtttagagggtgaggtgacagagaaaagtgatagaagg
gtggtaaggagtttgaggaggaagagtaagaggctgagtcttgagaagagggttgctttg
aggaggaggaggaggagggataagagttgcagtgatgaagggaaaggtgaactatacagt
gaggatgttgagagtctagtgaaaggatattctgttgctactgatttggtaagcttggat
tggaagaagatgaagataccgcctgttctgccttcttctcaacatgcctggttgttcaag
ttgatgcagcccctgaaggcaattctgaaggttaaagaagatctgacaatggatttggga
agggaagctatagaaggggaagttgcagctgccacaaacatgtgtgtagcagaaatgcgg
agacatgtggaggtgggccaagctgccagaaataagctcatcaaggtcctcctctctttc
catatcattccatgtacacatgttaagttatataacaaatactgcacatgtcatggctgg
ttttgcttattttatgaggtggaatcttcccctcatgcacttgtgttaaaactaaattac
aaatacttattggagaaaaagccattgtttcccatgtctctcttgaattcaacacaaact
gcttctcaaatgtgtctaatggtcaggcaggtgattcaaagagcaaagctggaatttctg
tttgaacatggatggttaccaactgatgaagagatcatggaaaaagtgggtatttctgag
gagaagtatcatgatgttcttcgggcctcaaaaccagttttctccctcaatgcaaagcat
gtcacaactcaggaggagctggtgaatggtgtcatggacatggatggtgtcactggtgat
aagcgtaagcctgctgcccttctcaggctagccttggatgatgtgttagattcgttgaag
cccaaggagagcttagtaatcaggcagagatatgggcttgatggcaaaggagatagaact
ctcagtgagattgctggtaatttgaatatctctagagagatggtcagaaaacatgaagtg
aaggcgttgatgaagctcaaacatcctgcacgtgtcgattatcttcgcagatacattgta
taa
DBGET
integrated database retrieval system
