Amborella trichopoda: 18437210
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Entry
18437210 CDS
T02990
Name
(RefSeq) phenylalanine--tRNA ligase, chloroplastic/mitochondrial isoform X1
KO
K01889
phenylalanyl-tRNA synthetase alpha chain [EC:
6.1.1.20
]
Organism
atr
Amborella trichopoda
Pathway
atr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
18437210
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
atr01007
]
18437210
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
atr03016
]
18437210
Enzymes [BR:
atr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
18437210
Amino acid related enzymes [BR:
atr01007
]
Aminoacyl-tRNA synthetase
Class II (U)
18437210
Transfer RNA biogenesis [BR:
atr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
18437210
Prokaryotic type
18437210
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2d
FDX-ACB
Motif
Other DBs
NCBI-GeneID:
18437210
NCBI-ProteinID:
XP_011624498
UniProt:
W1PPF1
LinkDB
All DBs
Position
Unknown
AA seq
438 aa
AA seq
DB search
MATGIGRQTPCALLLRTRPALNHALTSLANPSLFSARRLFSLSFSSSSLATNKQHKRGPQ
PILSLLEIGGVKIGKDDVVRENDPTNNVTDSIFSKIGLQLHRRDNHPIGILKNAIYDYFD
ANYGGKFIKFDDICPLVSVKENFDDVLVPANHVSRSYNDTYYVDAQTVLRCHTSAHQAEL
LRRGHSHFLVTGDVYRRDSIDSTHYPVFHQMEGVRVFSPAEWIPSGLDATSYAATDLKKS
LEGLARRLFGAVEMRWVDTYFPFTNPSFELEIYFQEKWMEVLGCGVTEQEILRRNGRLDN
IAWAFGLGLERLAMVLFEIPDIRLFWLTDKRFTSQFSGGQLGVKFNPFSKFPPCYKDMSF
WINDSFTENNLCEVVRGIAGDLVEEVRLIDNFNKKGMTSHCYRIAYRSMERSLTDEEINE
LQLNVREQVQSKLNVVLR
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggccactggcattggaagacaaaccccttgtgccctacttctccgtacgagaccagct
ctaaaccatgccctaacatccctcgcaaaccctagccttttcagcgcgagaagactcttc
tccctctctttctcttcttcatctcttgccactaataagcaacacaagaggggccctcaa
cctatactctcattgcttgagattggtggagtcaagattggcaaagatgatgttgtgagg
gaaaatgatcctacaaacaatgtcaccgattcgatattctcgaaaattgggctgcagctt
cataggagggacaaccatcccattgggattttaaagaatgctatttatgattatttcgat
gcaaattatggtgggaagttcatcaagtttgacgatatctgcccacttgtttctgtgaaa
gagaactttgatgatgtgttggttccagctaatcatgtaagcaggagctacaatgacacg
tattatgttgatgctcaaacagtgttaaggtgccatacaagtgctcatcaggcagaatta
ttgaggagaggacacagccattttcttgtcactggagatgtttatcgtagggattctatc
gactctactcactatcctgtatttcatcagatggaaggggttcgtgttttctcccctgct
gaatggatcccatctggcctggatgcaacttcatatgcagccactgatttaaagaagtcc
ctcgagggcttagcacgccgcttgtttggtgctgttgaaatgcgctgggttgatacttat
tttccttttacgaatccatcatttgaattggaaatatactttcaggagaagtggatggaa
gtgttgggttgtggagtaactgagcaggaaatactaagaagaaatggtagactggataat
atagcatgggcatttgggcttggtcttgaacgactagcaatggtcctgttcgaaataccg
gacattcgcctcttctggttaactgacaagcggtttacatctcaattttctggggggcag
ctgggcgttaaattcaatccattctcaaagttccccccatgctataaagatatgagtttt
tggatcaacgattcatttactgagaataatctttgtgaagttgtcagaggtattgctggg
gatcttgttgaggaggtacgtttgattgacaacttcaacaagaaaggaatgacaagtcac
tgctatagaattgcttaccgatcaatggagcgctctctgacagatgaggagataaatgaa
ttgcagttaaatgttagagagcaggtgcagtcgaagttgaatgttgttctacgatga
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