Amborella trichopoda: 18437218
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Entry
18437218 CDS
T02990
Name
(RefSeq) putative methyltransferase NSUN6
KO
K21971
methyltransferase NSUN6 [EC:2.1.1.-]
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
atr03016
]
18437218
Transfer RNA biogenesis [BR:
atr03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
18437218
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
PUA
Methyltransf_31
FtsJ
RsmF-B_ferredox
SipA_2nd
Motif
Other DBs
NCBI-GeneID:
18437218
NCBI-ProteinID:
XP_011624504
LinkDB
All DBs
Position
Unknown
AA seq
586 aa
AA seq
DB search
MHLVFLMNWGSFMLGNIVSVRFHSSLATKMDAAERYRYNPKLEWNPRVKEYFIKAYGEQH
FQCICDALTRPSGYSCIRVNNLKSTSDVIIDKLMELYDKNSANSKSSFTNFIGKCQIPSM
DYVVVVQGSGPHKLEYGDEPNKPLKEVIVSRKCAEAVLRGAQIFVPGVMACSSHVEKGDV
VAVSVAVEQPGPHNGWGLGITRGTVLQGSKSDPQYFERCGLYIGQGVAMMSRAGIFGASQ
GIAIEMIKRVYELPSFYGILKGEIFLQNLPSIITAHVLDPQEGELILDMCAAPGGKTTAI
AILMKDMGEVVACDRSHNKVEDVKNLALELGLTCIKAYKLDALKAVLRPTDVPINSSNDT
SDMDIKGPQTPALCETELKSDIDKPCITNSIDEDTDVSTTANNKSYTSKAIARKQLRKMR
NGPGRNHCMGARVDKSVGFRPGTFDRVLLDAPCSALGLRPRLFAGEETLESLINHGKYQR
RMFDQAVQLVRPGGVIVYSTCTMNPGENEALVRYALDTYTFLSLAPQHPYVGGPGLVGGS
QVFDGEYFEEWLRPGEEVLVQRFDPSASLDTIGFFIAKFNVDQKQS
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgcatttggttttcctgatgaattgggggtcgttcatgctagggaacatcgtctctgtt
cgctttcactcttcgcttgccaccaagatggatgcagctgaacgctataggtacaatcct
aagctcgaatggaatcctcgagtgaaggagtattttatcaaagcttatggcgagcaacac
tttcagtgtatatgcgatgcccttacgcggccttctggttactcctgtatccgtgtcaac
aaccttaaatccacgagtgacgtcatcattgataagttaatggaattatatgacaaaaat
tctgcaaactcaaagagttcttttactaattttattgggaagtgccaaattcctagcatg
gactatgttgtcgttgtacaaggttcaggacctcacaagctcgaatatggtgatgaacct
aataagcctttaaaggaggtgattgtgagccgcaaatgtgctgaggctgttctccgagga
gcccaaatatttgtccctggtgtcatggcgtgtagttcacatgttgagaagggtgatgta
gttgcagtctcagttgctgtggaacaacctggtccacataatggatggggactgggcata
acacgtggaactgttttgcaaggatcaaaatctgatcctcaatattttgaaagatgtggc
ctttatattggccagggcgtagcaatgatgtcaagagctggtatatttggagcttcacag
ggtattgccattgaaatgataaagagagtctatgaactcccatcattctatggcatcttg
aaaggggaaatttttcttcagaacttgccaagcattattactgcccatgtccttgatcct
caagaaggagaacttatattggatatgtgtgccgctcccggtggtaaaacaacagcaatt
gcaatcttgatgaaggatatgggtgaagttgtggcatgcgatagatctcacaacaaggtg
gaggatgtaaaaaacttggcccttgaactgggcttgacctgtataaaagcatacaaactt
gatgctcttaaggctgttctacgaccgactgatgtccctatcaactctagcaatgataca
tcggatatggacatcaaaggtccacaaacccccgcattatgtgaaacagaacttaaatct
gacatcgacaaaccctgtattactaactcaattgatgaggatacggatgtcagtacaaca
gccaacaacaaaagctatactagtaaagccattgccaggaagcaattgagaaagatgagg
aatgggccaggcagaaaccattgcatgggtgctagggttgacaaatccgtgggatttagg
cccggcacctttgatcgtgtccttcttgatgctccttgttctgctttgggattgagacca
cgcctttttgctggagaagaaacattggaatcattgataaaccatggaaagtatcaaaga
aggatgtttgaccaagcggtgcagctcgtccgtcctggtggagttattgtgtattcaaca
tgtacaatgaatccaggagagaacgaggccttagttcgttatgctctggatacttacaca
ttcctttctttggcacctcaacatccttatgttgggggccctggccttgtgggcggtagt
caagtatttgatggggagtattttgaagaatggcttagaccgggtgaggaagtattggtt
cagagatttgacccctctgcttcgctggatactattggtttcttcatcgcaaaattcaat
gttgaccagaaacaaagctaa
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