Amborella trichopoda: 18437261
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Entry
18437261 CDS
T02990
Name
(RefSeq) diaminopimelate decarboxylase 1, chloroplastic
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
atr
Amborella trichopoda
Pathway
atr00300
Lysine biosynthesis
atr00470
D-Amino acid metabolism
atr01100
Metabolic pathways
atr01110
Biosynthesis of secondary metabolites
atr01230
Biosynthesis of amino acids
Module
atr_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
18437261
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
18437261
Enzymes [BR:
atr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
18437261
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-GeneID:
18437261
NCBI-ProteinID:
XP_006847540
UniProt:
W1PN30
LinkDB
All DBs
Position
Unknown
AA seq
486 aa
AA seq
DB search
MAASHLSHSAPHSLSFSKPLQNPTKLTFYSHFSLPKAQRRRLSLQAVLSENLPKVSSPIK
TRNRKFHHCFSKSEDGFLYCEKLKVQEIMEAVEKRPFYLYSKDQITRNFEAYMNALEGLD
YIIGYAIKANNNLKILEHLRGLGCGAVLVSGNELKLALHAGFDPTKCVFNGNGKLLEDLV
LAAEKGVFVNVDSEFDLENIVTAARIAGKRVPVLLRINPDVDPQVHPYVATGNKNSKFGI
RNEKLQWFLDAAKSHPNELKLVGAHCHLGSTITKVDIFRDAALLMVNYIDEIRAQGFEIS
YLNIGGGLGIDYHHTGAVLPTPMDLINTVRELVLSRGLNLIIEPGRSLIANTCCLVNRIT
GVKTNGTKNFIVIDGSMAELIRPSLYGAYQHIELVSPPAPDTEVSTFDVVGPVCESADFL
GKDRELPTPSKGAGLVVHDAGAYCMSMASTYNLKMRPPEYWVEDGSIVKIRHEETFEDHL
RFYEGL
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggcagcctctcacctctctcattctgctccccactctctctctttctctaagcccctg
caaaatccgacaaagctaacgttctactcccatttctcactcccgaaagcccaacgaaga
cgcctctctcttcaagctgtcttatcagagaatcttcccaaagtgtcttcacctataaag
accagaaaccgtaagttccaccattgcttcagcaaatctgaagatgggtttttgtactgt
gagaaactaaaggtccaagaaataatggaggccgtcgagaagaggcctttctatctctat
agcaaggatcagattaccaggaactttgaagcttacatgaatgctcttgaagggcttgat
tacattataggctatgcgattaaggcgaacaataatttgaagattttggagcatcttaga
ggattgggttgtggtgctgttcttgttagtgggaatgagttgaaattggctcttcatgct
gggtttgatccaactaagtgtgtattcaacgggaatggaaaactcttagaagacttggtt
ttggcagctgagaaaggcgtttttgtgaatgttgatagtgaattcgacttggaaaacatt
gtaactgccgcaagaattgcagggaaaagggtcccagttttgcttcgtatcaaccctgat
gtggatcctcaggtccatccctatgttgctactggaaacaaaaattccaaatttggtatt
agaaatgagaagctccaatggtttttagatgctgcgaagtcgcatcccaatgagctgaag
ctggtgggggcccattgccatcttggatcaacaattactaaggtggacattttcagggat
gctgcgcttcttatggtgaattacattgatgaaattcgggctcagggctttgaaattagt
tacttgaacattggaggtggtttgggaattgattaccatcatacaggtgctgtccttcca
actcctatggatctcatcaacactgtacgagagctggtcctttcccgaggtcttaatctt
attatcgagcctggaagatctctcattgcaaatacctgctgtctggtcaaccggatcact
ggtgttaaaacaaatggaaccaaaaatttcattgtgatagacggaagcatggcagaactt
atcaggcctagtctctatggggcttatcaacacatagagcttgtttctcctccagcacct
gatactgaagtttctacctttgacgtggttgggcccgtctgcgaatctgcagatttcttg
ggaaaagatcgagaattgccgaccccttcgaagggtgctggccttgtcgttcatgatgcc
ggggcatattgcatgagcatggcatcgacatataatttgaaaatgcgacctcctgaatat
tgggtggaggatggatccattgttaaaataaggcatgaggagacatttgaagatcatctc
aggttttatgaaggcttgtaa
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