KEGG   Amborella trichopoda: 18437356
Entry
18437356          CDS       T02990                                 
Name
(RefSeq) denticleless protein homolog
  KO
K11790  denticleless
Organism
atr  Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:atr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:atr04121]
    18437356
Ubiquitin system [BR:atr04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     18437356
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st WDR55 Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_EML EIF3I Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd MIOS_WD40 Beta-prop_WDR75_1st Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_DCAF4 WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_DCAF12 WD40_RFWD3 WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_WDR19_1st Beta-prop_Vps41 Beta-prop_SPT8 Beta-prop_WDR11_1st NBCH_WD40 Beta-prop_RIG_1st Beta-prop_Nup120_160 WD40_like
Other DBs
NCBI-GeneID: 18437356
NCBI-ProteinID: XP_020524724
LinkDB
Position
Unknown
AA seq 584 aa
MDASSTHLSFFKDVKSRELNASKVRKTPFLGALASENGGPGSGVIASEHNGSHTLPLAVS
FGKSSKGCHVLAVSDEEGYISFYNTQLNFPPLKGHSRSEVEARLNAWIAHHNAIFDICWI
RDDAYILTASGDQTIRIWDVEKKASLGIMKEHKASVKSLSSHPVNSDMIVSGSRDGSVIL
WDMRCNSINQKGLGEPCLGPTAIIKNAHVYAPQMKRNRRTKGAVASMSITSVLYLKDEFS
IASGGDIDSVVKIWDTRCLKEHVAEAHPMCPSMDKKTRAHGIACLSQDTSGVFLVASCMD
NRIYLYNVIHPDKGPMESFSGHLNGSFYIKAGISPDGSHILSGSSDGNAYIWEVRKPEAN
LMVLKGHEGDVTAVAWCPSEVGKIATCSDDFTIRVWNTQSCPNLNTMRSPSSIRQRVTAF
PASIEPRKLNMDLPARSCPKRQGKEEGTRFPSVDSPARAGPSCPKTQKQEALRFCVLDPA
VQAPINRHLQEETLSFMGMDSTAPNCPESREEAQVFHGSPPHHKTIEAETPMDCKKQSVL
GPFTMDEVEFQRTPEASVRSPSSVLNSPSSLKRRTIRDYFMMAA
NT seq 1755 nt   +upstreamnt  +downstreamnt
atggatgcatcttcaacccatttatcattcttcaaggatgtcaaatcgagagagctcaat
gcttctaaagtaagaaagacgccttttcttggagctttggcgtcagaaaatggtgggcct
ggctctggagttattgcttcagagcataatggaagccatactcttcctttggctgtatca
tttgggaagagcagtaaaggatgccatgttcttgcagtatctgatgaggaaggatacatt
agcttctataacacacaattgaattttcctccacttaagggtcattctaggagcgaagtg
gaagctagactcaatgcttggatagctcatcataatgcaatttttgatatatgttggatt
agggatgatgcctacattttgacagcttcaggagatcaaacgattagaatatgggatgta
gagaagaaggcaagcttgggcattatgaaagagcacaaagccagcgtgaaatcactatca
tctcatccagttaattctgatatgatcgtttctggttcaagagatggttcggtcatactt
tgggacatgcgatgcaactccattaaccaaaagggacttggggagccttgtttagggcct
actgctattattaaaaatgcacatgtatatgctcctcagatgaaaagaaataggcggacc
aagggggctgtggcttcaatgagcatcacgtcagttctttatcttaaagatgaattctcc
attgctagtggtggagatatagacagtgttgtgaagatctgggatactcgatgcctgaaa
gagcatgttgctgaagcccaccctatgtgcccatctatggacaagaagacaagggctcat
ggaatcgcttgcctatctcaagacacaagtggtgtatttcttgtagcatcttgtatggat
aacaggatttacttgtacaatgtgattcaccctgacaaaggacctatggaaagtttctca
ggccacctaaatggctctttttatatcaaggctggaattagcccagatggatcacacatt
ctcagtggctctagtgatggaaatgcgtacatatgggaggtgaggaaacctgaggcaaat
ctaatggtgctgaagggccacgaaggagatgtcactgctgtagcctggtgtccatctgaa
gtaggcaagatagcaacatgttcggatgattttacgattcgtgtatggaatactcaaagc
tgcccaaacttgaacacaatgagatccccatcctcaatacgacaaagagtgactgcattt
cctgcatctattgagcctcggaagctgaacatggatttgcctgcccgaagctgcccaaaa
cgccaaggtaaagaagagggaacaagattcccaagtgtggactccccagcccgagctggc
ccaagctgcccgaaaacccaaaagcaagaagctttgaggttttgtgttttggatccagct
gttcaagctcccataaaccgtcatttacaagaagagactttgagttttatgggtatggac
tcaacggcccctaactgcccagaatctcgagaagaagcacaggtctttcatggctcccca
cctcaccataaaaccattgaagctgaaactcctatggactgcaagaaacaaagtgttttg
ggtccttttacaatggatgaagtagagtttcagaggacaccagaggcaagtgtgaggagc
ccatcatctgtgttgaactcgccttcttcattaaaaaggagaaccatcagggattatttt
atgatggctgcctga

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