Amborella trichopoda: 18437356
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Entry
18437356 CDS
T02990
Name
(RefSeq) denticleless protein homolog
KO
K11790
denticleless
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atr04121
]
18437356
Ubiquitin system [BR:
atr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
18437356
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_EML
EIF3I
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
MIOS_WD40
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_DCAF12
WD40_RFWD3
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_SPT8
Beta-prop_WDR11_1st
NBCH_WD40
Beta-prop_RIG_1st
Beta-prop_Nup120_160
WD40_like
Motif
Other DBs
NCBI-GeneID:
18437356
NCBI-ProteinID:
XP_020524724
LinkDB
All DBs
Position
Unknown
AA seq
584 aa
AA seq
DB search
MDASSTHLSFFKDVKSRELNASKVRKTPFLGALASENGGPGSGVIASEHNGSHTLPLAVS
FGKSSKGCHVLAVSDEEGYISFYNTQLNFPPLKGHSRSEVEARLNAWIAHHNAIFDICWI
RDDAYILTASGDQTIRIWDVEKKASLGIMKEHKASVKSLSSHPVNSDMIVSGSRDGSVIL
WDMRCNSINQKGLGEPCLGPTAIIKNAHVYAPQMKRNRRTKGAVASMSITSVLYLKDEFS
IASGGDIDSVVKIWDTRCLKEHVAEAHPMCPSMDKKTRAHGIACLSQDTSGVFLVASCMD
NRIYLYNVIHPDKGPMESFSGHLNGSFYIKAGISPDGSHILSGSSDGNAYIWEVRKPEAN
LMVLKGHEGDVTAVAWCPSEVGKIATCSDDFTIRVWNTQSCPNLNTMRSPSSIRQRVTAF
PASIEPRKLNMDLPARSCPKRQGKEEGTRFPSVDSPARAGPSCPKTQKQEALRFCVLDPA
VQAPINRHLQEETLSFMGMDSTAPNCPESREEAQVFHGSPPHHKTIEAETPMDCKKQSVL
GPFTMDEVEFQRTPEASVRSPSSVLNSPSSLKRRTIRDYFMMAA
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggatgcatcttcaacccatttatcattcttcaaggatgtcaaatcgagagagctcaat
gcttctaaagtaagaaagacgccttttcttggagctttggcgtcagaaaatggtgggcct
ggctctggagttattgcttcagagcataatggaagccatactcttcctttggctgtatca
tttgggaagagcagtaaaggatgccatgttcttgcagtatctgatgaggaaggatacatt
agcttctataacacacaattgaattttcctccacttaagggtcattctaggagcgaagtg
gaagctagactcaatgcttggatagctcatcataatgcaatttttgatatatgttggatt
agggatgatgcctacattttgacagcttcaggagatcaaacgattagaatatgggatgta
gagaagaaggcaagcttgggcattatgaaagagcacaaagccagcgtgaaatcactatca
tctcatccagttaattctgatatgatcgtttctggttcaagagatggttcggtcatactt
tgggacatgcgatgcaactccattaaccaaaagggacttggggagccttgtttagggcct
actgctattattaaaaatgcacatgtatatgctcctcagatgaaaagaaataggcggacc
aagggggctgtggcttcaatgagcatcacgtcagttctttatcttaaagatgaattctcc
attgctagtggtggagatatagacagtgttgtgaagatctgggatactcgatgcctgaaa
gagcatgttgctgaagcccaccctatgtgcccatctatggacaagaagacaagggctcat
ggaatcgcttgcctatctcaagacacaagtggtgtatttcttgtagcatcttgtatggat
aacaggatttacttgtacaatgtgattcaccctgacaaaggacctatggaaagtttctca
ggccacctaaatggctctttttatatcaaggctggaattagcccagatggatcacacatt
ctcagtggctctagtgatggaaatgcgtacatatgggaggtgaggaaacctgaggcaaat
ctaatggtgctgaagggccacgaaggagatgtcactgctgtagcctggtgtccatctgaa
gtaggcaagatagcaacatgttcggatgattttacgattcgtgtatggaatactcaaagc
tgcccaaacttgaacacaatgagatccccatcctcaatacgacaaagagtgactgcattt
cctgcatctattgagcctcggaagctgaacatggatttgcctgcccgaagctgcccaaaa
cgccaaggtaaagaagagggaacaagattcccaagtgtggactccccagcccgagctggc
ccaagctgcccgaaaacccaaaagcaagaagctttgaggttttgtgttttggatccagct
gttcaagctcccataaaccgtcatttacaagaagagactttgagttttatgggtatggac
tcaacggcccctaactgcccagaatctcgagaagaagcacaggtctttcatggctcccca
cctcaccataaaaccattgaagctgaaactcctatggactgcaagaaacaaagtgttttg
ggtccttttacaatggatgaagtagagtttcagaggacaccagaggcaagtgtgaggagc
ccatcatctgtgttgaactcgccttcttcattaaaaaggagaaccatcagggattatttt
atgatggctgcctga
DBGET
integrated database retrieval system