KEGG   Amborella trichopoda: 18437486
Entry
18437486          CDS       T02990                                 
Name
(RefSeq) protein SDE2 homolog
  KO
K25059  replication stress response regulator SDE2
Organism
atr  Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:atr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:atr03041]
    18437486
   03032 DNA replication proteins [BR:atr03032]
    18437486
   03400 DNA repair and recombination proteins [BR:atr03400]
    18437486
Spliceosome [BR:atr03041]
 Complex C
  Other components
   Complex C specific factors
    18437486
DNA replication proteins [BR:atr03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    18437486
DNA repair and recombination proteins [BR:atr03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    18437486
SSDB
Motif
Pfam: SDE2 SDE2_2C ubiquitin
Other DBs
NCBI-GeneID: 18437486
NCBI-ProteinID: XP_006847757
UniProt: W1PMR0
LinkDB
Position
Unknown
AA seq 433 aa
MATHQILVRLLDGQTRCIQIENPRITGSSLKNLIRERTGIPVPFQRLVAGALEISETSLL
SSINGLFPSCTLLLRLRGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGRRLRHVNAEK
KLEEWKAEEEERRLEKVAEEFLKKQSNSLKKKNGKDVDNYLEKYREETAKSMEEVDEAVK
ASIDLCKGGKRKVLHELEAGSKKLKLWMLEEEEEDDDEDDMDGKSVVVDEGCSTQREAFN
KEECASHDISVSGMRSTSGASCSSSYRSLKNDSSDSDLTENDSLNSLEVISEETEENSAK
GIDECHELSLSGSVVAEGCLVGEINAHREDKFEEALEGNKENACDFEEALEGNKENVCNG
STSARGSEMPLNFDNFNAPPDIEVLGLERLKLELQARGLKCGGTLQERAARLFLLKTTPF
DKLPKKLLAKPKD
NT seq 1302 nt   +upstreamnt  +downstreamnt
atggctactcatcaaattctggtcaggttattggacggccaaaccagatgtatccagatc
gaaaaccctagaatcactggttcatccctcaagaatctaatcagagagagaactggtatc
cctgttccctttcaaaggttggtggctggagccctagaaatctctgaaactagcttgctt
tcatcgatcaatggcctgttcccttcttgtaccctcctcttgagattgagaggtggaaag
ggaggtttcggatctcttttgagaggggctgccaccaaggctggccaaaagaagaccaac
aattttgacgcctgccgtgatatgagtggaaggaggcttcgtcatgtgaatgcagagaaa
aaacttgaggaatggaaggctgaagaagaggagaggaggcttgagaaagttgcagaggag
ttcttgaagaagcagtcgaatagtttgaagaagaagaatgggaaggatgtggataattat
ctggagaagtatagggaggaaactgcaaagtctatggaagaagtagatgaggctgttaag
gcgtcgattgatttatgcaaggggggaaagcgtaaggttttgcatgaactagaagcagga
tcaaaaaagctaaagctctggatgcttgaagaagaggaagaagatgatgacgaggatgac
atggatgggaagtctgtagtcgttgatgaaggatgttctactcaaagagaggctttcaat
aaggaagagtgtgcgagtcacgatatttcagttagtggaatgcgttcaaccagtggtgct
tcttgctcatcatcctatcggtccctgaagaatgactcctcggatagtgatttgacagag
aatgattcactcaattctcttgaggttatatctgaagagacagaagaaaactctgccaag
ggtattgatgaatgtcatgagcttagtctttcaggtagtgttgttgctgagggctgtttg
gttggggaaattaatgctcacagggaagataaatttgaagaagctttggaaggaaataag
gaaaatgcttgtgattttgaagaagccttggaaggaaataaggaaaatgtttgtaatggg
agcacgagtgctcgtggttcagagatgcctctgaactttgacaatttcaatgcacctcca
gatattgaggtattaggtctggagaggttgaaattggagttgcaagcgcggggtttgaaa
tgtggaggtaccctccaggagagagctgcgaggctatttctgctaaagactacacctttt
gacaagttgcccaagaagttgcttgctaagcctaaagactaa

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