Amborella trichopoda: 18437530
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Entry
18437530 CDS
T02990
Name
(RefSeq) F-box/LRR-repeat protein 4
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atr04121
]
18437530
Ubiquitin system [BR:
atr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
18437530
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_6
LRR_4
LRR_At5g56370
LRR_RPS2
F-box_5
LRR_At1g61320_AtMIF1
LRR_NXF1-5
F-box-like
Motif
Other DBs
NCBI-GeneID:
18437530
NCBI-ProteinID:
XP_006847795
UniProt:
W1PNS3
LinkDB
All DBs
Position
Unknown
AA seq
407 aa
AA seq
DB search
MGTSIAERETRVCINDALTDDELRAILSKLQSERDRDSFGLVCKKWLMLQSSERKKLCVR
AGPVMLERIARRFRGARELDISQSVSRSFYPGTLDADLSVIAEGFKSLQFLNLQNCKGVT
DTGLKALARGLSHLQSLDASHCRKLTDKGFIAISEGCHKLRSLHLSGCKSVSDSLLHALS
KNSRFLEELGLQGCINVTDSGVSALADGCHLIMFLDLSKCSKIGDIGLSKLSKACPSLIT
LKLQDCSNIGDETLFSLAESCPDLETLNVGGCRNITDESIKRLASSCNKNLKNLQLEWCL
NISDSAVSFVLSKCDNLEVLDIGCCNEVTDMAFGGLKGLSLRVLKASSCPGITVLGISVL
VEVCQNLEYLDIRSCPHLTPEACEQAGLHFPKSCKVNFIGSLSEVIF
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgggaacctcgatcgcggagagagaaactagggtttgcataaacgatgcccttaccgat
gatgagctcagggctatactatcaaagttgcagagcgaaagggatagggatagctttggc
ctcgtgtgcaaaaaatggttgatgctgcagagcagtgagagaaagaagctttgtgttaga
gctgggccagtgatgctcgaaagaatagctcggaggtttagaggagcgagagaattggat
atttctcagtctgtatcgagatcattttatccgggaactcttgatgctgatctctctgtg
atagctgaggggtttaagagcttgcagttccttaatctgcaaaattgtaaaggagttaca
gacactggattgaaggcgcttgctcgaggtctttcgcatttgcaaagtttagatgcttcc
cattgtcgtaaattgacagacaaaggcttcattgccatttctgaagggtgtcataaatta
agaagcttacacctatctggttgcaaatcagtttctgactcattattacatgccttgtcc
aagaactctcggtttctggaagaactaggtttacagggttgcatcaatgttactgactct
ggtgtctctgctttagcagatgggtgccatttaatcatgttccttgaccttagcaaatgc
tccaaaattggagatattgggctttcaaagctctcaaaggcgtgcccttctcttatcacc
cttaagcttcaggactgttctaatattggtgatgaaaccctgttttccttggcggagtct
tgcccagatctcgaaactctaaatgttgggggttgtagaaacatcacagatgagtctata
aaacgattggcttcttcatgcaacaagaacctcaagaatttgcagttggagtggtgtttg
aatatctcagactctgctgtaagctttgtgctctcaaagtgtgataatcttgaggtttta
gatattgggtgttgtaatgaggtgactgatatggcttttggaggcttgaaggggttgtct
ttgagggttttgaaggcaagtagttgccctggaattacggttctggggatcagtgttttg
gttgaagtgtgtcaaaatttggagtatttggacatcagatcgtgccctcatcttacaccg
gaggcttgcgagcaagccggtctgcactttccgaaatcatgtaaagtgaatttcattggc
agcctttctgaggtaatattttga
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