Amborella trichopoda: 18437580
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Entry
18437580 CDS
T02990
Name
(RefSeq) thioredoxin-like protein YLS8
KO
K12859
U5 snRNP protein, DIM1 family
Organism
atr
Amborella trichopoda
Pathway
atr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
18437580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atr03041
]
18437580
Spliceosome [BR:
atr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
18437580
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DIM1
Thioredoxin
Thioredoxin_7
DUF3192
Motif
Other DBs
NCBI-GeneID:
18437580
NCBI-ProteinID:
XP_020524920
LinkDB
All DBs
Position
Unknown
AA seq
142 aa
AA seq
DB search
MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL
VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIVETVY
RGARKGRGLVIAPKDYSTKYRY
NT seq
429 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatttgctgcctcatcttcactctggttgggccgtggaccaggccatccttgct
gaggaggagcgcctcgttgtcatccgcttcggccatgactgggacgagacttgcatgcag
atggatgaggtgctcgcctcagtggccgaaactatcaagaactttgcagtcatatacttg
gtggacatcacagaggtaccagacttcaacacaatgtatgagctctacgacccctccact
gttatgttcttctttcgtaacaagcacatcatgatcgatctcggcaccggtaataacaac
aagatcaactgggctcttaaggacaagcaagagttcattgacattgtcgagactgtctat
agaggggctcgaaaggggcgcggtttggtgattgccccaaaagactactcaaccaaatat
cgatactag
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integrated database retrieval system