KEGG   Amborella trichopoda: 18437716
Entry
18437716          CDS       T02990                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit 4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
atr  Amborella trichopoda
Pathway
atr03020  RNA polymerase
atr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:atr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    18437716
  09124 Replication and repair
   03420 Nucleotide excision repair
    18437716
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:atr03021]
    18437716
   03400 DNA repair and recombination proteins [BR:atr03400]
    18437716
Transcription machinery [BR:atr03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     18437716
DNA repair and recombination proteins [BR:atr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      18437716
SSDB
Motif
Pfam: RNA_pol_Rpb4
Other DBs
NCBI-GeneID: 18437716
NCBI-ProteinID: XP_006847979
UniProt: W1PQR2
LinkDB
Position
Unknown
AA seq 139 aa
MSGEEEENAAELKIGEEFLKAKCLMNCEVALILDHKYEQLQQMSDDPSNQISQVFEKSLQ
YVKRFSRYKNPDAVRQVREVLSRNQLAEFELCVLGNLCPETVEEAIAMVPSIKAKGRSNN
DDDAIEKMLNDLALIKKFE
NT seq 420 nt   +upstreamnt  +downstreamnt
atgtctggagaagaggaagaaaatgccgcagagctcaagattggagaagagtttcttaag
gccaagtgtttgatgaattgtgaagttgcccttattctggaccacaagtatgaacaactt
cagcagatgtctgatgacccctcgaatcagatatcccaagtgtttgagaagtctctgcaa
tatgtgaagcgcttcagtcgctacaaaaaccctgatgcagtcaggcaggttcgagaagtc
ctgagcagaaaccagttggcagaatttgagctgtgtgtgctcggcaatctctgccctgaa
actgtagaggaagcgatagcgatggttccgtctatcaaggcaaaggggcgctctaataac
gatgacgatgcgattgagaagatgttaaatgatctagcacttatcaagaaattcgaatag

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