Amborella trichopoda: 18437853
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Entry
18437853 CDS
T02990
Name
(RefSeq) coronatine-insensitive protein homolog 1b
KO
K13463
coronatine-insensitive protein 1
Organism
atr
Amborella trichopoda
Pathway
atr04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
18437853
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atr04121
]
18437853
Ubiquitin system [BR:
atr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
18437853
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
18437853
NCBI-ProteinID:
XP_006848115
UniProt:
W1PPR8
LinkDB
All DBs
Position
Unknown
AA seq
590 aa
AA seq
DB search
MQVRGLTRSVSFGISDVALECVMAYLDEPRDRSAVSLVCKRWHYIDSLTRKQITIAFCYS
ISPCRLRNRFPRLESLKLKGKPRASMFNLIPEEWGGYAGPWISEISETFNCLKSLHFRRM
VVTDKDLAILVAGRGHMLNALKLDKCSGFSTKGLLHVTQNCRSLKTLFLEESSFEEEDGE
WLHELALNNTVLEVLNFYATEVKKINIQDLELLAKNCRNLISLKISDCEILDLVGVFRRA
NALEEFGGGYVSEPLAGEVNKYGNMYFPPRLARLGLSYMSENEMPMIFPFAASLKKLDLQ
YTLLNTEDHCQLIQRCPNLEVLEVRNVIGDRGLEVVAQHCKKLRRLRIERGDDEQGLEDE
QGMVSQRGVSALAEGCPELEYLAVYVSDITNAALESVATFCKNLCDFRLVLLEREERITD
LPLDNGVQALLRGCQKLRRFALYLRPGGLTDRGLGYIGRYSKNIRWMLLGFVGETDAGIL
EFSRGCPDLQKLELRGCCFSESALARAVINLASLRYLWVQGYRASPTGRDLLRMSRPFWN
IEIIPPTIENGMPDDVGGFELPAQILAYYSLAGRRDDHHGTVIPLSPSSS
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgcaagttcgaggcctcacccgatcagttagctttggaatctctgatgtggccctggaa
tgtgtcatggcctatctcgatgaacctcgagatagaagcgccgtgtctttggtttgtaaa
agatggcactatattgattctttgactcgaaagcaaataaccatagccttctgctactcc
attagtccttgccgtctaaggaacaggttccctcggcttgagtccctgaaacttaaggga
aagcctcgagcttcgatgttcaatctgataccggaggagtggggtggttatgcagggcca
tggattagtgagatatctgagacttttaactgcttaaagtctctccattttcgtcgcatg
gttgtgactgataaggatcttgctattcttgttgctggacgcggccatatgcttaatgcg
ctcaagctagacaagtgctcggggttttctaccaagggccttttacacgttacccagaat
tgcagatctctaaagactttgtttttagaagaaagctcttttgaggaggaggatggtgaa
tggcttcacgagcttgctttgaataatactgtcctagaagttttaaatttttatgcaaca
gaggtgaaaaaaataaacattcaagatcttgaactgttagctaagaattgtcgcaattta
atttctttgaagataagcgactgtgaaatcttggacctagttggtgtgtttcgaagagca
aacgcattagaagaatttgggggaggttatgtcagtgaaccattggcaggagaggtgaat
aaatatggaaacatgtactttccgccaaggttagctcgtcttggtcttagctacatgagt
gaaaacgagatgcctatgattttcccttttgcagcttcactgaagaagctagacttgcag
tacacattactaaacaccgaggatcattgccagctgattcagcgctgccccaatcttgaa
gttcttgaggtgaggaatgtgataggtgacagaggactagaggttgttgctcaacattgt
aaaaaattacgcaggcttcgaattgagcgtggggacgatgagcagggtttggaagatgaa
cagggaatggtttctcagagaggagtatctgccctagctgaaggttgccccgaactagag
tatttggctgtttatgtatctgatatcactaatgcagctttagaatcggttgccactttt
tgcaaaaacctctgtgactttcgcctggttttacttgaacgagaagaaagaataactgac
ttaccactcgacaatggggttcaagctctattaagaggctgccagaaactaagaaggttt
gctctttatctaaggccaggtggtctaactgacagaggtcttggttatattggaagatac
agtaaaaatatcaggtggatgcttttgggttttgttggtgaaacagatgctgggattttg
gaattctcaagaggctgccccgatcttcagaaattggagctacgaggttgttgtttcagt
gaaagtgcattggctagggcagttataaatttagcatctctgagatatctatgggtgcag
ggctatagagcatcgccaactggtcgggatcttttaaggatgtctcgtccgttttggaac
atagagatcattcctccaacgattgagaatggtatgcctgatgatgttgggggttttgag
ctgccagctcagattctagcgtattattcactggctggaagaagagatgatcatcatgga
acagtcattccgttatccccatcatcctcatga
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