Amborella trichopoda: 18437923
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Entry
18437923 CDS
T02990
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
atr01009
]
18437923
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atr03021
]
18437923
Enzymes [BR:
atr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
18437923
Protein phosphatases and associated proteins [BR:
atr01009
]
HAD phosphatases
Fcp/Scp phosphatases
18437923
Transcription machinery [BR:
atr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
18437923
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
dsrm
NIF
Motif
Other DBs
NCBI-GeneID:
18437923
NCBI-ProteinID:
XP_011624749
LinkDB
All DBs
Position
Unknown
AA seq
834 aa
AA seq
DB search
MLHLGFRSILYHGDTCLGEVDVVPQNQNPQILSAIKKEIRISHLTAPSERCPPLAVLQTI
SPFGVCFKLKSSGISSDQSPMHCLFSACFRELRTAVVLFGEDELHLVAMQNKLEKFSCFW
AFTVSPKLYASCLAMLNLRCLGIVFDLDETLIVANSMRSFEDRIDALQRKIGTETDPQRI
SGMSAEIKRYQEDKALLRHYSENDQVFENGRLVKVQMEEVPPLSDNHEAVVRPVVRLHER
NIVLTRINPEIRDTSVLVRLRPAWEDLRSYLTAKGRKRFEVYVCTMAERDYALEMWRLLD
PEAHLINPKQLLDRVVCVKSGSRKSLLNVFQDGICHPKMAMVIDDRLNVWEDKDQSRVHV
VPAFAPYYAPQAEATNAVPILCVARNVACDVRGGFFKEFDENILRRVSIMYYEDNVADLP
YTPDVSNYLIPEDAGAVMTGNRELPISEGMNDMEVEKRLNKQDENPSAEGTPRPFVSNHQ
ELRESSLQNATFQSIPAGQAILRTPICLQKEEMNQKQLSRRTECVPQEPNGFQLEKQRPL
RALSCRGVEGTAPYDRSLQSSHATIEEQCSGDDRLRQNHMQSSISSFSDEEMPSSRETVN
PKDVVAEETSSVPVAVLREIGSKCGLKVEFKSVSNTTTGLQFVVEVVFTGEKIGEGTGRT
RKEAQHQAAVNALRTLAYKYVEHISPDSGAVNGDLNNLSHGMDNGFLRNALGSSGSESSP
RKEPQLNEQLNFMEDSKRAPNSISALQEPYTSESISLVFHDKSPLSTYSNKTEFHPQAEV
AGQILRNGMGLGSERVKLQAAEEGRQNLQALTNRRNQWLRSLRSQNSVPTKRSQ
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgcttcatttagggtttcgctcaatcctttaccacggcgatacttgcttgggagaagtc
gatgtggtcccccaaaatcaaaatccccagattttatctgcaatcaaaaaggaaattagg
atcagtcacctcactgctccaagtgagaggtgtcctcctcttgctgttctccagaccatc
tcgccctttggtgtttgcttcaaactaaagtcgagcggcatctcatctgatcaatcgcct
atgcattgtctcttcagtgcctgctttcgtgaactcaggactgctgttgtattgtttggt
gaagatgagcttcatttagtggcaatgcagaacaaattggagaagttttcatgcttttgg
gctttcactgtttctccaaaactctatgcttcttgtttagcgatgctaaatcttagatgc
cttggcattgtattcgatctcgatgaaacacttatagttgcaaatagcatgcgatctttt
gaggatcggattgatgccttacaacgtaaaattggcactgaaactgaccctcaacgaata
tctggaatgtctgctgaaatcaagaggtaccaagaagataaagctttattgcgccattat
tcagaaaatgatcaagtatttgaaaatgggaggttggttaaggtccagatggaagaagtt
cctccgttgtcagataatcacgaagctgttgttcgtccggttgttaggttacatgagcgg
aacattgtcttaacacgcattaaccccgagatccgtgacactagtgtgcttgtaaggttg
cgtcctgcatgggaagatcttagaagttatttgactgctaaaggccgtaagagatttgag
gtttatgtttgcacgatggctgaaagggattatgctcttgaaatgtggaggcttcttgac
cctgaagcacatctgataaatccgaaacaacttctagatcgtgtagtgtgtgtaaagtca
ggttcaaggaagtctttgctaaacgtctttcaagatggaatctgtcaccccaagatggct
atggtgattgatgataggttaaatgtctgggaggacaaagaccaatcccgagtccatgtg
gtccccgcatttgctccatactatgctccacaggctgaggctacaaatgctgttcccatc
ttgtgtgttgcaagaaatgtggcatgcgatgttagaggtggcttcttcaaagaatttgac
gagaacattttacgaagagtttccattatgtattatgaagacaatgtagcggatttgcct
tatacccctgatgtgagcaactatttgatacccgaggatgctggtgctgtgatgactgga
aatagagagcttcccatttctgagggcatgaatgatatggaggtcgaaaagagattgaat
aaacaagatgagaacccaagtgctgaaggaactcctcgtccttttgtttccaaccatcaa
gagcttcgagaatcatctctacaaaatgcaacatttcaatcaattccagctggacaagcg
attttgagaacccccatatgtttgcagaaggaagagatgaatcagaagcaactgagcaga
agaaccgaatgtgtcccacaagaaccaaatggatttcagcttgagaagcaacggcctctt
cgtgctctgtcatgtcgtggtgtagagggtactgctccctatgacagatcccttcaaagt
tctcatgcaacaattgaagagcaatgttctggtgatgataggttaagacagaatcacatg
cagtcgagtatctcttccttttcagatgaggaaatgccttcaagtcgggaaaccgtgaac
cctaaagatgtggtggctgaagaaacatcgtcagtgcctgttgcagttctacgagaaatt
ggatcaaagtgcggtttaaaggttgagttcaaatcagtttcaaatactaccactggattg
cagtttgtggtagaggtagtgtttactggggaaaaaattggtgaaggtactggtagaacg
aggaaggaagctcagcaccaagctgctgtgaatgcccttcgaactttagcttacaaatat
gtcgaacacatttcacctgattctggagctgttaatggggatcttaataacctttctcat
ggaatggataatggttttttaagaaacgcacttggttcatctggatctgaatcatctcca
agaaaggagcctcaactgaacgaacagttaaatttcatggaggattccaaaagggcgcca
aattctatctctgcccttcaagaaccatacacatcggaaagcattagtctagttttccat
gataagtctcctttatccacttattcaaataaaacagagttccatcctcaggcggaagta
gctggacagattttacgaaatggaatgggtttaggcagtgaaagggttaaactgcaggct
gctgaagagggtcgtcagaatttacaagctctaaccaatagaagaaaccagtggttacgg
tcacttaggtcccaaaattctgttcctacaaaaagatcacaataa
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