Amborella trichopoda: 18438141
Help
Entry
18438141 CDS
T02990
Name
(RefSeq) serine/arginine-rich splicing factor SR30 isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
atr
Amborella trichopoda
Pathway
atr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
18438141
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atr03041
]
18438141
Spliceosome [BR:
atr03041
]
Common components
Common spliceosomal components
SR proteins
18438141
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Motif
Other DBs
NCBI-GeneID:
18438141
NCBI-ProteinID:
XP_011624918
LinkDB
All DBs
Position
Unknown
AA seq
308 aa
AA seq
DB search
MSGRASRTLYVGNLPGDIREREVEDLFYKYGPIVDIELKIPPRPPGYCFIEFEDARDAED
AIRGRDGYNFDGHRLRVELAHGGRNHSSSSDRYGGSYGGGRGLSRRSEYRVLVTGLPSAA
SWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAYI
RVKEYKSGKSLSRSRSRSHSVSRSRSKSPVPSRSRSPSRSRSRSIPPKAKSLSRSRSRSI
SSRSRSRSPPPRVKGRPGSKSKSPSPSAQRRHKRTSSRRSPSRSRSISRSRSPVAKSDRS
RSLDSRGR
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgagtggccgggccagtaggaccctctatgttggcaatttaccaggagacattcgtgaa
agagaagttgaagatttattctataagtatggtccaattgttgatattgaattgaagatt
ccccccaggccccctggctactgttttattgagtttgaagatgctcgtgatgctgaagat
gctatccgcggtcgtgatggttacaactttgatggccaccggctaagggtagaacttgcc
catgggggtcggaaccattcttcatcttcagatcgctatggtggtagctatggtggtggg
cgtggactttcaaggcgctctgaatatagagtgcttgtaactgggttgccgtcagctgct
tcatggcaagacttgaaagatcatatgcgtcgggctggtgatgtttgcttttctcaagtg
tttcgtgatggcagtggcacaactggtatcgtggactacacaaactatgatgacatgaaa
tatgcgataaggaaacttgatgactctgagttcagaaatgcattttctcgggcttacata
cgggtaaaggagtacaagtcagggaagagcctatcccgtagccgcagtcgtagtcactca
gtttcaagaagtagaagcaagagtcctgttcctagtcgtagccgaagtcctagtagaagc
agaagtcgaagcatacccccgaaggccaaatccctatctagatctcgatctaggtccatt
tcatcacgttctcgttcacgatcaccaccaccgcgtgtgaaaggaagacctggatctaag
tcaaagtcaccatctccctctgcacagcgtcggcataagcgaacaagcagtaggaggagc
cccagcaggagccgcagtatttcgcgttctcgctcccctgtggcaaaatctgatcgtagc
cgctctctggattctcggggccgttga
DBGET
integrated database retrieval system
