Amborella trichopoda: 18438272
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Entry
18438272 CDS
T02990
Name
(RefSeq) heat stress transcription factor A-5
KO
K09419
heat shock transcription factor, other eukaryote
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
atr03000
]
18438272
Transcription factors [BR:
atr03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
18438272
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSF_DNA-bind
APG6_N
FPP
DUF3450
Motif
Other DBs
NCBI-GeneID:
18438272
NCBI-ProteinID:
XP_006848522
UniProt:
W1PPW2
LinkDB
All DBs
Position
Unknown
AA seq
502 aa
AA seq
DB search
MDGAQSSSKDNSGGSGGGPAPFLIKTYEMVDDSKTDDVVSWSSSTTSFVVWNPPEFARLL
LPTYFKHNNFSSFIRQLNTYGFRKIDPERWEFANEDFVKDQKHMLKNIHRRKPIHSHSLP
QQQGTSYFGDTERAALEEEIENLTGEKNAFLINLNKFIQQQDGTKALLEMLEQRVREMEQ
RQERMISFVHRAISNPSFVDQLVRHVQLNTQFPLMNKKRRLPKVDFLQEVVENNFVDNQI
IHSASEINTLKPMLGFAQNVSKGFANKLKLELSPAASDNLLSGSGHSSYEDGDSPQVRTS
REAPKEVGMRAKGFLFVSDGLELSDTGTSLGSEKVNTQFPCETVIPPEPHGVRQCSTSTE
EGDGNISCHLNLTLSSSPLPVNRSDTSTRIAPSHVSQEKDASAEIRSSSREDHFKVLDRS
PAGNNKMPSSRELANKVQAPQATVGRVNDVFWEQFLTERPGSSDAEEASSSFRGHLSEER
DDRTSAFSKSWNSKQNMEQLTL
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggatggggcacagagtagtagtaaggataacagtggtggtagtgggggtgggcctgct
cctttcctgataaagacctatgagatggtggatgatagtaaaacagatgatgttgtttca
tggagttcgtcgactactagctttgtggtgtggaacccccctgaatttgcccgccttctc
cttcctacttatttcaagcacaacaatttctccagcttcatcaggcagcttaatacatac
ggcttccgtaagattgacccagagcgatgggaatttgctaatgaggattttgtaaaggat
cagaagcatatgctcaaaaatatacaccgacgtaaacctatacacagtcacagtctacca
caacagcaggggacaagctactttggtgatacagaaagagcagctcttgaagaagagatc
gaaaacctcaccggagagaaaaatgcctttctaattaacttgaacaaattcattcagcag
caggatggaacaaaggcactgctggaaatgttggagcaacgtgttcgtgaaatggagcag
aggcaagaaaggatgatttccttcgtgcatagggccatcagcaacccttcttttgtagac
cagcttgttcggcatgtccaattaaacacacaattcccactcatgaataagaagaggaga
ttgcctaaagtggattttttgcaagaggttgtagagaacaactttgtggacaatcagatc
attcatagtgcttctgaaataaacactttgaaacccatgttggggtttgcacaaaacgtc
agcaaaggctttgcaaataagctgaaattggaattatctcctgctgcctcagataatctg
ctttctggtagtgggcatagctcttacgaagatggggacagtccacaagtgagaacctct
agagaagctccaaaagaggtcgggatgagagcaaaaggttttttatttgtgtctgacgga
ttagagctttcagatactggtacttctcttgggtcagaaaaggttaatactcagtttccc
tgtgaaactgttattcctccagagccacatggtgtgcgacagtgttccacatcaactgaa
gaaggagatggtaacatctcgtgccatctgaatctgactctctcttcttccccattgcca
gtcaacagaagtgatacttcaacaagaattgcaccatctcatgttagtcaagagaaggat
gcttcagctgagattagaagcagttctagagaggatcatttcaaagtgcttgatagaagt
ccggctggcaataataagatgccttcatcaagagaattggcaaataaagttcaagcaccc
caagctaccgtaggcagagtaaatgatgtgttttgggagcaattcctaacagaaaggcct
ggttcttcagatgctgaagaggcaagctctagttttaggggacatcttagtgaggagagg
gacgacagaacatcggctttcagtaagtcttggaatagtaagcaaaacatggagcagctg
acactctga
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