Amborella trichopoda: 18438308
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Entry
18438308 CDS
T02990
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X2
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
atr
Amborella trichopoda
Pathway
atr03015
mRNA surveillance pathway
atr04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
18438308
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
18438308
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
atr01009
]
18438308
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atr03019
]
18438308
03036 Chromosome and associated proteins [BR:
atr03036
]
18438308
Protein phosphatases and associated proteins [BR:
atr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
18438308
Messenger RNA biogenesis [BR:
atr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
18438308
Chromosome and associated proteins [BR:
atr03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
18438308
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR3_1st
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
Inh
Motif
Other DBs
NCBI-GeneID:
18438308
NCBI-ProteinID:
XP_006848557
UniProt:
W1PQ04
LinkDB
All DBs
Position
Unknown
AA seq
522 aa
AA seq
DB search
MIPVGEEVGVPPSLEWRFSQVFGERAAGEEVQEVDIISAIEFDKTGEHLATGDRGGRVVL
FERADGRDRTCRKELERLDHPITKHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKVQWCE
MANGTLFLLSTNDKTIKYWKVQEKKVKKICEMNLESAPVRNGYVAGTAGALNPKICAANG
GSPQRHHNYPDFVFPPGGIPSLHLPVVVSHEKNVVPRCRRVYAHAHDYHINSISNNSDGE
TFISADDLRINLWNLEISDQSFNIVDVKPANMEDLTEVITSAEFHPTHCNTLAYSSSKGT
IRLIDLRQSALCDTHAKLFEEQEAPGSRSFFTDIIASISDIKFAKDGRYILSRDYMTLKL
WDLNMETGPISTFQVHEYLRPKLCDLYDNDSMFDKFECCLSGDGLRVATGSYSNLFHVFG
CAAGSHEAMTLEASKNPTRRQVQTPSRPSRSFGNSTRGRRRGLESDANGGAFDFTTKLLH
LAWHPTANSIACAAANSLYMYHADDPSKQASPPHVLEPDTTT
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgataccagttggagaagaagttggtgttcccccttctctggaatggagattctctcag
gtatttggggaacgtgcagcaggagaggaagttcaggaagtggatattatctcggcaatt
gaatttgataaaacgggtgagcatcttgcaactggagatcgtgggggtcgtgtggttcta
tttgaaagggcagatggaagagatcgtacatgtaggaaggagctcgagagattggatcat
cccatcacaaaacatcctgaatttcgctacaagacggagtttcaaagccatgagcctgag
tttgattatctcaagagcttggaaatagaggagaaaattaacaaggtgcagtggtgtgaa
atggcaaatgggacccttttccttctgtccacaaatgacaagacaataaaatattggaag
gttcaagaaaagaaggtaaagaagatttgtgagatgaatttggaatcagcacccgtaaga
aatggatacgtagctggcacggctggagcattgaacccaaaaatatgtgcagccaatggt
ggatctccacaaaggcaccataattatcctgactttgtgtttcctccaggaggaatccca
tcacttcatctaccggtggtagttagccatgaaaagaacgttgtaccgaggtgtcggcga
gtatatgctcatgctcatgactatcacatcaactccatttcaaataacagtgatggggag
acatttatatcagcagatgatctgagaataaatttatggaacttggaaataagtgatcaa
agtttcaatatcgtagatgtgaagcctgcaaacatggaggacctcaccgaggtgataaca
tctgcggagttccatcctactcactgtaatacactcgcatacagtagttcaaagggcaca
attcgacttattgacttacggcaatcagctctttgtgatactcatgcaaaactatttgag
gagcaggaagcaccagggtcaaggtcatttttcaccgacataattgcttcaatatcagat
attaagtttgcaaaagatggaagatatattctgagtcgtgattacatgacacttaagtta
tgggatttaaacatggaaactgggccgatttcaactttccaggtccatgagtatctacga
cctaagctctgtgatttgtatgacaatgattcgatgtttgacaaatttgagtgctgtcta
agtggtgatggccttcgggttgcaacgggttcttatagcaacctgttccatgtctttggt
tgtgctgctggcagccatgaagcaatgactttggaggccagcaagaatcctacaagacga
caagttcagacaccttctaggccttcaagatcctttgggaattcaacacgtggtcgcaga
agaggactggaaagtgatgccaatggtggggcatttgacttcacaacaaagctgcttcac
ctagcatggcaccctactgccaactcgattgcctgtgctgctgcaaatagcctgtacatg
taccatgcggatgacccatcaaaacaagcctcaccccctcatgttcttgaacctgataca
acgacatga
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