Amborella trichopoda: 18438317
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Entry
18438317 CDS
T02990
Name
(RefSeq) protein argonaute 1D
KO
K11593
eukaryotic translation initiation factor 2C
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atr03019
]
18438317
03036 Chromosome and associated proteins [BR:
atr03036
]
18438317
Messenger RNA biogenesis [BR:
atr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
18438317
Chromosome and associated proteins [BR:
atr03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
18438317
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
18438317
microRNA pathway
RISC loading complex
18438317
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
18438317
NCBI-ProteinID:
XP_006848566
UniProt:
W1PJH9
LinkDB
All DBs
Position
Unknown
AA seq
972 aa
AA seq
DB search
MVIYGFVVIKVSVSGKGLFCFELAWFFLMPRKRRTPKEGSGESSSQASNVSNIGNIQQSV
HAPASHSGPSQTPPPTIRRPVLSSPSARAGPSSRSDVPDLPQAVQASVGPQVPGAPPSSS
KAITFPRRPGLGKLGRQIMLKANFFLLKFPHEDIFHYDVTISPQVPSKNSCRTIITDLSN
AHGGQELGNHLAVYDGRKSMYTAGRFPFSSKEFTIKVAEEDVKSQTQRREKQYKVVIKFA
SQLSMHRLEQFLSGDQTELPQDVLQALDVVLRESPSRRFSSIGHSFFSGTFGRKILTEGL
EAVKGFFQSARPTQSGLALNIDMSATTFIKEQEVIAYVADILRKDLRRPLVDADLVKVKT
ALKGLRIEVTHRGNMRRKYRIVGLSSQSSRETIFTVERNGTSKRVSVYGYFYEVYNMKLV
YPLLPCLQVGSLERPSYIPMEVCKIVKGQRYLKSLNQRQTTEMLTFTCQDPRNRETDILK
AVVENKYNTSPYVNEFGIEVSETLVPVHARLLACPKLKYCNDRGREISYTPELGYWNMRD
KRFLNGGRLNNWTCVNFSSSDISVAVAMTFYQQLFGVCRTLGMTCNLNPILRICEAQSDS
LDQVLNGIQTELTASGKTLDLLFVILPNNGPLYGDLKYKCETEYGWVSQCCLRKTIMEPK
PQLLGNLALKVNVKVGGRNTALADPIPHNIPQFSNAPFIVFGADVTHPRPGDDASPSIAA
VVASRDWPQATQYAAIISGQGHRKEIIEALYTETHDPEHGFQAGGMIREHLLSFKAATNR
EPAHILFFRDGVSEGQFSQVVRDELTAINKGCKSLGANYEPRITFVVVQKRHHTKFFPQT
YGDDKTSDKKGNLLPGTVVDRDICHPAENDFYLCSHGGLKGTSRPAHYHVLHDDNKLTAD
QLQSLIYNMCYTYVRCNRSVSIIPAAYYADLAAFRGRHYRDHVERSESGRGSVPIRVIPS
VKDRVKRFMFYC
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggtgatttacggtttcgtggtgatcaaggtttcagtttcaggaaaaggcttattttgc
tttgaactagcttggtttttcctcatgcctagaaagagaagaacaccaaaagagggcagt
ggggagtcttcttcacaggcctcaaatgtctcgaacataggcaatattcagcaatcagta
catgcgcctgcttctcattcaggcccatctcaaaccccacctcccactataaggaggcct
gtcttgtctagtcccagtgctagagcaggtccttcgagtaggagtgatgtccccgacctg
ccccaagctgttcaggcctctgtaggtcctcaagttcctggtgctcctccaagctcaagc
aaggccattacatttcctcggaggccagggcttggaaaacttggtcggcaaataatgtta
aaagcaaacttctttcttttgaagttccctcacgaggatattttccattatgatgtgacc
atttctccacaagtaccatcaaagaactcttgtcgtacaattatcacagacctctcaaat
gcccatggaggtcaggaactgggcaaccatttagctgtctatgatggtagaaagagtatg
tatacagctggacgttttccattttcatcaaaggaattcacaataaaagtggctgaagaa
gatgtcaaatcacagacacagagacgagagaaacaatacaaagtggtgattaaattcgca
tcacagttaagtatgcatcgcctggagcagttcctgagtggtgaccaaacagagcttcca
caagatgtgttacaagcactcgatgttgtgctgcgtgagtcaccttcaaggaggttttct
tctattggccattcctttttctctgggacatttggtagaaaaattttaacagagggattg
gaagctgtgaagggtttcttccagagcgccagacctacacaatctggtttagcattaaat
attgacatgtcagccacaacatttataaaagagcaagaagtgatagcctatgttgcggat
attttacgcaaggatttgaggaggcctttggttgatgcagatcttgtgaaggtaaagaca
gctttaaagggcctcagaattgaggtcacacatcggggaaatatgcggaggaagtatcgt
atagtgggtttgtcctctcaatcttcaagggaaacaatttttactgtggagagaaatgga
acatcaaagagggtttctgtgtacggttacttttatgaagtttataatatgaaattggtg
tatccactcttgccttgtctccaagttggaagccttgagaggccgagttacattccaatg
gaggtctgcaaaattgtgaagggtcagcggtatttgaagtctctaaaccagagacagacc
acagagatgctgactttcacttgtcaagaccctcgtaatagggaaacggacatcctgaag
gctgttgtggaaaataagtacaatacgagtccttatgtgaatgagtttggaatagaagtc
agtgaaacattagtccctgttcacgcgagacttttagcttgtccaaagcttaagtattgt
aatgacaggggaagagaaatatcttatacccctgaattgggatactggaatatgagagat
aagagatttctaaatgggggtcgtttgaacaattggacttgtgtgaacttttcatcaagt
gacatctctgtggcagttgcaatgaccttttatcagcaactttttggagtttgcagaaca
ttggggatgacatgcaatttgaatcccatattgaggatttgtgaggctcaatcagatagt
ttggaccaagtactaaatggtattcagacagaattgactgcctctggaaagacattggac
cttttatttgttattctacctaacaatgggcctttatatggggatttgaagtacaagtgt
gaaactgaatatggatgggtttcccaatgctgtctaaggaaaactatcatggaacccaaa
ccacaactcttaggaaatttggcacttaaagtcaacgtaaaggtgggtggaagaaataca
gctcttgcagatcctatacctcacaacatacctcagttcagtaatgcgccctttattgtt
ttcggagctgatgttactcatcctcgtccaggagatgacgcttctccatccattgctgca
gtggttgcttctcgagactggcctcaggccacacagtatgcagcaatcattagtggtcaa
ggccacagaaaggaaattattgaagccttgtacacagagacacatgatcctgaacatggt
tttcaggctggcggcatgataagggaacatctattgtcattcaaagctgcgacaaataga
gagcctgcacatatcttatttttcagggatggtgttagcgaggggcagttttcacaggtt
gtcagagatgaacttactgctatcaacaaaggttgcaagtcccttggagcaaactatgag
cctcgtattacatttgtagtggtgcagaagcgacatcacaccaagttcttccctcagaca
tatggggatgacaaaacttctgataagaaaggaaatctattacctggcacagtggttgac
agagatatatgccatcctgctgaaaatgatttttacctctgtagccatggtggtctcaag
gggacaagtcgtcctgctcattatcatgtccttcacgatgataacaagctcacagcagat
cagctccagagtttgatatataatatgtgctacacgtatgttcgctgcaaccgttctgtc
tcaataattccagctgcatattatgctgatcttgctgcatttcgcggtcgccactaccgt
gatcatgtggagagatcagagagtggccggggaagtgttcccattcgagtcattccatct
gtgaaagacagggtaaagaggttcatgttctattgttga
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integrated database retrieval system
