KEGG   Amborella trichopoda: 18438502
Entry
18438502          CDS       T02990                                 
Name
(RefSeq) DNA repair protein UVH3 isoform X1
  KO
K10846  DNA excision repair protein ERCC-5
Organism
atr  Amborella trichopoda
Pathway
atr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:atr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    18438502
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:atr03400]
    18438502
DNA repair and recombination proteins [BR:atr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     18438502
SSDB
Motif
Pfam: XPG_N XPG_I UBM
Other DBs
NCBI-GeneID: 18438502
NCBI-ProteinID: XP_006848746
UniProt: W1PK18
LinkDB
Position
Unknown
AA seq 1467 aa
MGVHGLWDLLAPVGRRLSVENLAGKKLAIDASIWIIQFMKAMRDERGEMVKNAHLIGFFR
RICKLLFLRTKPVFVFDGGTPALKRRTVIARRRQRENAQAKIRKTAEKLLLNHLKKRKLE
ELAKEFAVGRKKIGAKGKGVVTEPSKLVAEEEKEGVKEAYNQDNADALLAASLAAEEDGA
FISEASTSAAGVPIEEEDNLDESEEMIFPTGQGKVDPAILAALPPSMQLDLLVQMREQLM
AENRQKYQKVKKAPSKFSELQIHSYLKTVAFRREINEVQKFAGGRGVGGLPASRIASESN
REFIFSSSYSGDKNVLSTSGVSSSGDTEHQLQGTNSKFQPVESIPSTIGFSSNTRAAIDE
SERELDGAVETYLDERGRVRVSRLRGMGIRMTRDLQWNLEMMKELEQVKSTETNNMVGLV
ATTDDEVAKGAPSSICPKKASSLKENNERDLFEGRNGDSIQMDENNLLHTCSTLGGTHAI
EISFSEDEFVGHGKDEDEFFTSLVAENTASMEESHPSQVEASNGSDEGEVDWEDGTCDLP
VETSNSPIETKQTVSKGSLAEEAEIQEAIRRSLQENSGGKCINLFSEVETPKPSIQRFDI
CKESNKIISSEDGEHKIDGNSVLLDFPLTGSQFEASLHTRMGSEQDGIKHQIAGPVLSDA
YQDQKLQSHKNCSIMQDELVVDFRKQEIVSELEGPPNVNSDVPAIMASNVFDAFSGDTPL
NNLHHSLSSQHHCDIENAPVDIKEFSSKEKGLSDDIKDREISAKEADLDLKISSSKEKEL
SDDAKETEVNAVEVDLLADQEDYHKDVNEFQDRMEFQDTLDEEISLLRQEQLDLGDQQRK
LERNAEYASSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELSNLVDGVVTDDSDAFLF
GARSIYKNIFDDRKYVEMYLIKDVENELGLTRDKLIRMALLLGSDYTEGISGVGIVNAIE
IVNAFPEEGGLQKFREWLESPDPSILNKVHAQTGKETRKKSSKESKKDEDVCESMGDVLL
DDNSDGRCNIDQESEDIANLKQIFMEKHRNVSKNWCIPSSFPSESVLSAYKSPQVDESTE
PFLWGKPDLLFLRKLCWERFGWPSQKADELLLPVLREHNRHETQLRLEAFYTFNEKFAKI
RSKRIQKAVKGITGNRSSEMMHVPGSKEASTSSEPKRRKGKSPPNSNEDAFAEVLNNDTF
VEGNDEECTGNQVSKQQRKQRTTTREKARRERGNGKGRGRGRGMKGGYNAKPSETSSCDG
EECNEKTRFGQMELPVLRRSARPKKNVKYAGAGDSLNQSDSDYIAEVGHERDPSSCGGIV
GAIHSINHEVAVENVDGSSSKDYLSMGGGFCPEEAEPRSDLDEPVLGCVDTIIANNSNKS
RSRELLDEAFGAAQTWDHEPILHGRSVSEVQPANANGPQQEDFQDKDEEERNQTNDNPNF
QALEKSKSQQPETGLKAMPTLRRKRKM
NT seq 4404 nt   +upstreamnt  +downstreamnt
atgggagttcatggcctttgggaccttctcgctccagttggtcgccgcctctccgtcgaa
aacttagccggaaaaaaactagcaatcgatgcgagcatttggataattcagtttatgaag
gcgatgagagatgagaggggggagatggtgaagaatgcccatttgatagggtttttcagg
cgaatttgtaagctcttgtttttgaggacgaagccggtgtttgtgtttgatgggggcacg
ccggccctgaagagacgcactgtgattgcccgcaggaggcagagggagaatgcgcaggcg
aagatcaggaaaactgcggaaaagctgctcctcaatcatctcaagaaacggaagttagaa
gaattagctaaagaatttgcagtagggaggaagaaaattggagcaaagggaaaaggggtt
gtgactgaaccctctaaattggtggcagaggaagaaaaggagggagtgaaagaagcttac
aaccaggacaatgcagatgcattgttggcagcttctcttgctgctgaagaagatggtgcg
tttattagcgaggcatcaacctcagctgctggggttcccattgaagaggaagacaacctg
gatgagagtgaggaaatgatctttccaacaggacagggaaaagttgacccagcaatattg
gcagcattgcctccatctatgcaactagatcttctggttcagatgagagagcaattgatg
gcagaaaacagacagaagtatcagaaggttaagaaggcaccctcaaaattttctgagcta
cagatacattcttatctcaaaacagttgcttttcgtcgggagataaatgaagtgcagaaa
tttgctggtggaaggggagttggtggattgccagcttccaggattgcatctgaaagcaac
agagagttcatcttttcatcatcttatagtggtgacaagaatgtgctgagtacctctggg
gtcagtagcagtggagatactgagcatcagttgcaagggactaattctaaatttcaacct
gtggaatctatcccatctacaattggtttcagctctaacactagagctgccattgatgaa
tctgagagggaattggatggtgcagtagagacttaccttgatgagaggggacgggttagg
gttagcagattaaggggaatggggattcgaatgactcgtgatctgcaatggaatttggaa
atgatgaaagaacttgagcaagtgaagagtacagaaacaaataatatggtgggcctggtt
gccaccactgatgatgaagttgccaagggtgctcccagttctatctgccctaaaaaagct
tcaagtttgaaggaaaataatgaaagagatttgtttgaaggcagaaatggggattcaata
cagatggatgagaacaatcttcttcatacatgctctacccttggaggcactcatgccata
gagatctccttctcagaagatgaatttgttggccatgggaaagatgaggatgagttcttt
acaagtttggttgctgaaaatactgcatccatggaggagtcgcatccatctcaggttgag
gcatcaaacggcagtgatgaaggggaggtcgattgggaagatgggacctgtgatttacct
gttgaaacatctaactctcctattgaaactaagcaaactgtttcaaaaggaagtctggct
gaagaagctgaaatccaggaggcaataaggaggagtctacaggaaaacagtggaggaaaa
tgcatcaacctattttcggaagtggagactccaaagccttccattcaaagatttgatatt
tgtaaagagagcaataaaataatttcttctgaagatggtgagcataagattgatggaaat
tcagttctgttggactttcctttgactgggagccagtttgaagcatcacttcataccagg
atgggatctgaacaagatgggattaagcatcaaattgctggacctgtcttgtcagatgcc
taccaagaccaaaaactacagtcccataaaaactgctcaattatgcaagacgaactcgtg
gttgactttaggaaacaggaaattgtttctgagttagaggggcctcctaatgtcaattct
gatgtacctgctatcatggccagcaatgtgtttgatgcatttagtggtgatactccacta
aataatttgcatcattcgttatcttcacaacatcattgtgatattgaaaatgctcctgtt
gacattaaagagttttcatcgaaggagaaggggttatctgatgatataaaggatagggag
attagtgctaaagaagctgatcttgatctcaaaatatcttcatcgaaggaaaaggagtta
tctgatgatgcaaaggaaacggaggtaaatgctgtagaagtagaccttcttgctgatcaa
gaagattaccataaggatgtgaatgaatttcaagaccgtatggagtttcaggatacattg
gatgaagaaatatctctattgagacaagagcagcttgatttgggtgatcaacagagaaag
cttgagaggaatgctgaatatgctagcagcgagatgtttgcagagtgtcaggagctgctt
caaatgtttggcttaccttatattattgcacctatggaagctgaagcacaatgtgcctat
atggagctaagtaatctcgttgatggggttgtgactgatgactctgatgctttcttattt
ggagcgcgtagcatatacaagaatatttttgatgaccgaaaatatgtcgagatgtacctt
ataaaggatgtggagaatgagcttggattaaccagagataagcttatccgaatggctttg
cttcttgggagtgattatactgaaggtatcagtggtgttggtattgttaatgctattgaa
attgtaaatgcatttcctgaggagggtggtctccagaagttcagagaatggcttgaatct
ccagatccttccattttaaacaaggtccatgctcaaactggcaaggaaactcgaaaaaaa
tcatcaaaagaaagtaaaaaggatgaagatgtctgtgaaagcatgggggatgttcttctt
gatgacaatagtgatgggagatgcaatattgatcaagaatctgaggatattgcaaacctg
aaacagattttcatggagaagcatagaaatgtgagcaagaactggtgtattccttcatcc
ttccccagtgagtctgttctttctgcttataaatccccacaagtcgatgaatcaacagag
ccgtttttgtggggaaagcctgatttgctttttcttcggaagttatgttgggaaaggttt
ggttggcctagccagaaggcagatgaattgctccttccagttttaagggagcataaccgc
catgagacccagttgcgtttagaagcattctacaccttcaatgagaagtttgcaaaaatt
cgtagcaagagaatccaaaaagctgtcaaaggaattacgggcaaccgatcctcggagatg
atgcatgtgcctggaagtaaagaagcttctacctccagtgaacccaaacgaagaaaaggg
aagagcccaccaaattcgaatgaagatgcatttgctgaagttttaaataatgacaccttt
gttgagggaaacgatgaggagtgtacaggaaatcaagtttcaaagcagcagaggaagcag
aggaccaccactagagagaaagcgagaagagagagagggaatggtaaaggaagaggaagg
ggaagggggatgaaaggtggctacaatgccaaaccatcagagaccagctcttgcgatggt
gaagaatgtaatgaaaaaaccagatttggtcaaatggagctccctgtgctgcgaaggtca
gcgcggccaaagaagaatgtaaaatatgcaggagctggggattccctgaatcaaagtgac
tctgattacattgcggaagtgggacatgagcgagatccatcttcttgtgggggaatagtt
ggagcaattcatagtattaatcatgaagtagcagtagagaatgtggacgggagttcctca
aaagattacctttctatgggaggtggattctgcccagaagaggctgaaccccgaagtgac
ctagatgagccggttctgggatgtgttgatactattattgctaacaatagtaacaaatct
cgttctcgagaattacttgatgaggcctttggtgctgcccaaacttgggatcatgagcca
attttgcatggaagatcagtgagtgaggttcagcctgcaaatgcaaatgggcctcaacag
gaagattttcaggataaggacgaggaggaacgcaatcaaacaaatgataaccctaatttt
caggccctggagaagtcaaaatctcagcaacctgagacaggtttaaaagcaatgcctact
ttgaggaggaaaagaaaaatgtga

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