KEGG   Amborella trichopoda: 18438523
Entry
18438523          CDS       T02990                                 
Name
(RefSeq) exopolygalacturonase
  KO
K01213  galacturan 1,4-alpha-galacturonidase [EC:3.2.1.67]
Organism
atr  Amborella trichopoda
Pathway
atr00040  Pentose and glucuronate interconversions
atr01100  Metabolic pathways
Module
atr_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:atr00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    18438523
Enzymes [BR:atr01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.67  galacturonan 1,4-alpha-galacturonidase
     18438523
SSDB
Motif
Pfam: Glyco_hydro_28 Beta_helix Pect-lyase_RHGA_epim
Other DBs
NCBI-GeneID: 18438523
NCBI-ProteinID: XP_011625087
LinkDB
Position
Unknown
AA seq 381 aa
MKHFSLFLVVLFLSSTVVFKTAQSRSVPGISFAKNYEAQTRSIQGISFAENYEYEEQAST
RELERPGGLALPTPSGSPGKHKSELGIQLPGQSRKCWSYSSWKSTFPAFSSGPDVFVRKR
LHTCSCVQVLFHVDGKAPHSITNGEIRGISSVDSKLFQILLFRCKNMKVQSIKISAPGDS
PNTDGIHIGSSSNISISQSRIGTGDDCISIGPGTAQVTVRDVFSGPGHGISVGSLGKFPK
EEDVQGIHVENCTISDTTTGLRIKTWADSASSSASNFTYEDIVMNNVANPIIIDQQYCPY
SSCPQKDPSPVKISDISFKNIRGTTSSKVAVNLLCSEAFLSQNVKLDDIKLEYNEQGRPS
TASCTNVKGVSAGVQAPPTCL
NT seq 1146 nt   +upstreamnt  +downstreamnt
atgaagcacttctctctctttctcgtcgttctcttcctgtcttcaaccgttgttttcaag
actgcacaaagtagatcagttccaggtatctcttttgcaaagaattatgaagcccaaact
agatcaattcagggtatctcttttgcagagaattatgaatatgaggagcaagcaagtacg
agagagctggagaggccaggaggtttggctctgcccacaccatcaggatctccgggcaag
cacaaatcggaattgggcattcagctgcctgggcaatctagaaagtgctggtcatatagt
agctggaaaagtacttttccggctttttccagtggtccagatgtttttgtgagaaagcgg
ttgcatacttgttcatgtgtgcaagtgctttttcatgttgatggaaaagctcctcattcc
ataacaaatggggagataagaggcataagttcagtggatagcaagctctttcaaatccta
ttgtttcgctgcaaaaatatgaaagtccagtccatcaaaatctcagcaccaggtgacagc
cccaatactgatggaatccatatcggctcttcatctaatatctcgatctcgcaatctcgc
attggaactggtgacgattgcatctccattggtcctggcaccgcccaagtaaccgtgaga
gacgtgttttctggaccaggacatggcatcagtgttggaagcttgggcaagttccccaag
gaggaggatgtgcaagggatacatgtggagaattgcaccatctcagataccaccactggt
ttgaggatcaagacttgggcagactcagccagcagctctgcctccaatttcacatatgaa
gatatcgtgatgaacaatgtggccaaccccatcatcatagatcaacaatattgcccatac
tcttcttgcccacagaaggatccttctccagtcaagatcagtgatataagtttcaagaac
attagaggaaccacttcttcaaaagttgcagtgaatctcttgtgcagcgaggctttccta
agccaaaatgtcaagctcgatgatataaaattggagtacaacgaacaggggagaccttcg
accgcctcgtgtaccaatgtgaagggggtctctgctggagtacaagcgccaccaacttgc
ctgtag

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