Amborella trichopoda: 18439009
Help
Entry
18439009 CDS
T02990
Name
(RefSeq) light-mediated development protein DET1 isoform X1
KO
K10571
de-etiolated-1
Organism
atr
Amborella trichopoda
Pathway
atr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
18439009
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atr04121
]
18439009
Ubiquitin system [BR:
atr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
18439009
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Det1
Motif
Other DBs
NCBI-GeneID:
18439009
NCBI-ProteinID:
XP_011625180
LinkDB
All DBs
Position
Unknown
AA seq
546 aa
AA seq
DB search
MFHASNNIVARIFSRQISSPRSGTSVHRSRQFYENLVPSYTIYDVDCPDYSFRKFTDDGQ
YLISFSRNNQELIVYRPTWLSYSCKGDDCESHGLPPEAKRFESYFTQLYCINLASGNESI
SKDFFLYMESNHFGVFATSTSQILDAPVTEGAIHGVPVIEKITLHLVRMEDGVIMDERTF
RNDFVNLAHNSGVFLYDDLLSIMSIRYQMIYILQIRASGHLVDVRAIGQFCQEDDELFLN
SHTQGFVPLDKGKQEESSICQDNSSMQLDQPTQGGAFLSGIKQRLLSFIFRGIWNEETDH
SLRVQRLKKRFYFHFQDYVDLVMWKVQFLDHHHLLIRFCSVDGGMSRNTDQYRAFFAVYN
METTEILAFYQNSAEELFHLFEQYCDHFRAPSRSPLYMNFISSHSNNIHALEQLRKQKDA
CLKNKATNFSQLVKKTLAFLPFHCQSQSPSPYFDQSLFRFDEKLISSTERHRPSTEHPIK
FISKRHPYSLKFKIKPGPEAGGVDGRSKRLSCFLFHPVLPFAISIQQTLQPSVINIHSVM
NIHFRK
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgttccacgctagcaacaatattgttgctaggattttttctcgtcagatttcgtctccc
cgctcaggcacaagcgtacacaggtccagacaattttatgagaacttggtcccaagttat
accatctatgatgttgattgtccagactattccttccgtaaattcactgatgatggccag
tatttgataagtttcagtaggaataatcaggaattgatagtttatcgaccaacatggttg
tcatattcatgcaagggagatgattgtgaatcacatggtctgccccctgaagcaaagagg
tttgagagctatttcacccagctctattgcatcaaccttgcatctggaaatgagtcgatt
agcaaagacttttttctatatatggaaagcaaccactttggtgtatttgccacttcaact
tcccagattcttgatgcacctgtcactgaaggagcaattcatggagtccccgtaatagag
aagataacacttcaccttgtgagaatggaagatggtgtcatcatggatgagaggactttc
cgcaatgactttgtcaatttggcccataactctggggtttttctgtatgatgatttgttg
tcgatcatgtctatccgttaccaaatgatatatattctccaaattcgagcatctggccat
cttgtggatgtgcgggcaattggacagttttgtcaagaggatgatgaacttttcctgaac
tctcatactcagggatttgtacccttagacaaaggtaaacaagaagagtcttccatttgt
caggataatagttctatgcaacttgatcagcctacgcaagggggtgctttcttgagtggt
atcaaacagcgcttgctttcatttatttttcgaggaatatggaatgaagaaacagatcat
tctctgagggttcaacggcttaagaagaggttttatttccatttccaagattatgttgac
ctggttatgtggaaggtacagttcctcgaccaccatcatcttctaatcaggttttgtagt
gtagatggagggatgtctcggaataccgatcaatatcgtgctttttttgctgtgtataac
atggagacgactgagatacttgcattttaccagaattctgcagaagaacttttccatttg
tttgagcagtattgtgatcacttccgtgcgccatccagaagtccattatatatgaatttc
atatcgtcccactcaaataatatccatgctcttgaacaactaaggaagcaaaaggatgca
tgtctgaaaaacaaagccactaatttttctcagcttgttaagaagacgttggcatttctg
cctttccactgccagtctcagagcccttcgccatattttgatcagtcacttttccgcttt
gatgagaagctgatatcctcaacagaaagacataggccctcaactgaacatcctatcaag
tttatttcgaagaggcacccttactccctcaagttcaagataaaaccaggccctgaggca
ggtggtgtagatggtcgttccaagagattgtcctgcttcctctttcaccctgtattgcca
tttgccatttcgattcagcagacactgcaaccatctgtcataaatatccattctgttatg
aatattcattttcggaaatga
DBGET
integrated database retrieval system
