KEGG   Amborella trichopoda: 18439291
Entry
18439291          CDS       T02990                                 
Name
(RefSeq) DNA polymerase epsilon subunit B isoform X1
  KO
K02325  DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
Organism
atr  Amborella trichopoda
Pathway
atr03030  DNA replication
atr03410  Base excision repair
atr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:atr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    18439291
   03410 Base excision repair
    18439291
   03420 Nucleotide excision repair
    18439291
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:atr03032]
    18439291
   03400 DNA repair and recombination proteins [BR:atr03400]
    18439291
Enzymes [BR:atr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     18439291
DNA replication proteins [BR:atr03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    18439291
DNA repair and recombination proteins [BR:atr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      18439291
SSDB
Motif
Pfam: DNA_pol_E_B Dpoe2NT DNA_pol_D_N
Other DBs
NCBI-GeneID: 18439291
NCBI-ProteinID: XP_011625269
LinkDB
Position
Unknown
AA seq 536 aa
MGASATLKKVQRKFKLRSLTLNREALNEVTTFLTNFSEEQEDEYLDLLLNQIEQTTLKKS
VLDKEVVRPIVELLLEADAAIDTGKSCSNEGALRIVDAFLVPKLSYDPIKKTFYEYTGNL
PIHGDASSKVALYRERYQLLNQRLLRNSDFSRPAFDTDITRSGGELIPIQALIGCTGRRW
IMGVISQMEDGHFFLEDLTAAVEIDLSNAKITTGFFVENTIILAEGELHPNGVFQVHTCG
FPPLEDGNASLAVHTGLDFFGAGYLTPEETARLVELEKKAVNDMFVILSDVWLDNEETME
KLAAVLDGYENVEVVPSLFVFMGNFCSRPCNLAFNSYSSLRSQFAKFGEMIAAHPRLKEG
SRFLFIPGPEDAGPSTVLPRCALPKYLTDELLNHVPNAIFSSNPCRIRFYTQEIVFFRRD
LLYRMRRSCLIPPSKDETDDPFGHLVATITHQSHLCPLPLTVQPILWNYDHCLRLYPAPH
TIVLADNCKQQVFKQEIRKNNKTLQIITCFNPGSFSCDSTFVAYRPCNQEVELSAL
NT seq 1611 nt   +upstreamnt  +downstreamnt
atgggggcttctgcgacactgaagaaggtgcagaggaagttcaagctgaggagtctaacc
ctaaaccgggaagctctcaatgaggtcacgacattcctcaccaacttcagcgaagaacaa
gaagatgaatatctagacctccttctcaaccagatcgagcaaaccacattgaagaagtct
gttctggacaaggaggtggttcgtcctattgtggaattgttattagaggctgatgctgca
atagatacaggcaaaagttgcagcaatgagggggccctgcgcatagtcgatgcttttctt
gtgcccaagttgtcttatgatcccatcaaaaaaactttttatgaatatacagggaatctg
cctattcatggtgatgcatcttcaaaagttgctttatatagggagagatatcagctgttg
aatcagaggcttttacgcaatagtgatttttctaggccagcttttgatacagatataacc
cgatcaggtggtgagttgattcccatacaagcattgattggatgcaccggaaggagatgg
atcatgggtgtaatatctcagatggaagatgggcatttcttcctggaggatctaactgca
gcagttgaaatcgacttatccaatgcaaagatcactacgggattctttgtggagaacact
ataattctggctgaaggtgagctgcatccaaatggggtgtttcaggtccatacatgcggc
tttcctcccttagaggacgggaatgcttctctagctgtacatacaggactagatttcttt
ggggctgggtatcttacacctgaagaaactgccagacttgtggagttggagaaaaaagca
gtgaatgatatgtttgtcattctctctgatgtttggttggataacgaagagaccatggaa
aagctagctgctgtcttagacggttatgagaatgtggaggtggtgccatctctcttcgta
tttatggggaacttttgctctcgtccttgtaacctggccttcaattcttactctagccta
agatcgcagtttgcaaagtttggagaaatgattgcggcacaccctcggttaaaagaagga
agccggtttttgtttatccccggtcctgaagatgcaggtccatcaactgttctacccagg
tgtgctttgcctaagtacctgacggatgagctcctaaaccatgtcccgaatgccattttc
tcaagcaatccttgcagaataaggttctacacccaagagatcgtgttcttccggcgagat
ctactctacagaatgcgcagatcgtgcctaattcctccttcaaaagatgagacagatgat
ccttttgggcatcttgttgctaccattactcaccagagtcatctttgcccactgcctctc
actgtacaacccatcctatggaactatgaccattgcttgaggttgtaccctgctcctcac
acgattgtattagcagataattgcaagcaacaggtattcaagcaagagatacgtaaaaac
aacaagaccctgcagataattacttgttttaacccaggctccttctcatgtgattctaca
tttgtggcctaccgcccatgcaatcaggaagttgagctatcagcactgtaa

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