Amborella trichopoda: 18439443
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Entry
18439443 CDS
T02990
Name
(RefSeq) uncharacterized protein LOC18439443
KO
K15082
DNA repair protein RAD7
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atr03400
]
18439443
DNA repair and recombination proteins [BR:
atr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
18439443
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_Ste50p
LRR_At1g61320_AtMIF1
HTH_3
Motif
Other DBs
NCBI-GeneID:
18439443
NCBI-ProteinID:
XP_006849671
UniProt:
W1PML8
LinkDB
All DBs
Position
Unknown
AA seq
853 aa
AA seq
DB search
MPVLRSGTITEAVVKESPNPKIEPMTPVQPDQKLRTHAASPSSLSESGLGLGLSPNGNYT
ISGPFLRRARRNLESRSGLSAGPDEEKDNTSSGSWLALGIGFSTCSGSKPVRKSARLAPK
LGLDGRDNIYNGDESTKKSGVKRLLVQDSNERLKKSRKEEAWDQNLSGSELLETKGVESL
NSLGTLSEIARNVKEFEERLENQQKNGGSGFEKPVDDVTETSGSCSKRAKRSRDKGKAVL
DSGHIGSCSTRPKRSRDKGKAISDSGHIAVSFPGFTHFNQENERSQNQDIHSGSVLGKAI
DNPLVILIEDEPEHEQIRQESWIDGSNNENEILFDNPKWNSRREANRQVARSVAERFARF
QPEIEEVEREDHKEGEENWPGPFSTAYDLLDKRETELEARKQRLASRKTSGPSLINWVPS
NKQEARVSKPPSLEQLCFGALSKNLEAVASLENWSNFPELFRNKFSKAAHKSRKMNSNIM
GLLFSGCPSEIRVWDCSLVTQEELQSILGNFNGEELKVLQFDFCGRSMTDGLLQSITTGF
PLLTNISIRGAYCLSDSGLDSLVSSTPSLRSINLSQCSFLSEVGIQTLVVKLGSVLRELY
IDDCDQFDAKAILPSLKKIENLEVLSIVGLQNVSDRFISELMLSHGCCLKELGLARCREL
TDKSIEYIAAYCNGLRALNLDNLLKLTDLAITSLTHGCTSSLEKLTLGHGVFSDEAVSTF
VETRGNSLKDLSLSGVKQAGEQTALAMSRCCTKKLQRLDVSWCREMTDEALGLIADSCLY
LQELRLFGCTEVTAKFLNGHSNPNLRIIGMNEPLFNYPPSMWESGEYYPNPLPSSLLSLS
LSLSLSRNSHCCE
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgttgcgatcaggaaccattacagaagccgttgtaaaagaatctccaaaccct
aagattgaaccaatgacgccagtccaacctgaccagaagctccgaacccatgctgcatcc
ccttcttccctgtcagaatcagggttagggcttggccttagccctaatggcaattataca
atcagcggccctttcttgcggagggcaaggcgaaacttagagtcaaggtcaggtttgagt
gctggccctgatgaggagaaagataatacgagttcaggatcatggttagcgttagggatt
gggttttccacctgctctggttctaaaccagttaggaagagtgcaaggcttgctcctaag
ttaggtttggatggacgagataacatatataatggcgatgaaagtaccaagaaatcgggt
gttaagagattactggttcaagattcaaatgagcgcctaaagaaatcgagaaaggaagaa
gcttgggatcaaaatttatctggctctgaattgttggagacgaaaggtgtggagtctctg
aattccttaggaactctttctgaaattgctagaaatgtgaaagagtttgaagagagactg
gaaaatcaacagaaaaatggaggatcaggatttgagaaaccagttgatgatgttacagaa
acaagtggttcatgctccaaaagggccaaaaggtctagagataaagggaaagctgtatta
gattcaggccacattggttcatgctcaacaaggcccaaaaggtctagagataaagggaaa
gctatatcagattcaggccacattgctgtaagttttcctgggttcactcattttaatcaa
gagaatgaaagaagccaaaaccaggatatccacagtggttcagttttgggcaaggccatt
gataatccacttgtgattcttatcgaagatgaaccagaacacgagcagatacgacaagaa
tcatggattgatggttcaaataatgaaaatgaaattctgtttgataatcccaaatggaat
tcaaggagagaagcaaatcgtcaagttgctcgttcagttgcagagagattcgctcgattc
caaccagagatagaagaagtagaaagagaagatcacaaagaaggagaagaaaattggcca
gggcctttcagtacagcctatgaccttctggataagagagaaactgaactggaagctcga
aaacagaggcttgctagccgtaaaacctcagggccctctttgatcaactgggttccttct
aataaacaagaagcccgggtctcgaagcccccatcgctggaacaactatgttttggggct
ttgagcaagaatttggaagccgttgcttccctggaaaattggtcgaattttcctgaattg
ttcaggaataagttcagtaaagcagcccacaagtctcggaaaatgaattcaaatattatg
gggctgcttttcagtgggtgcccatctgaaattagggtttgggattgttctctagtgacc
caagaggaacttcaaagcattctgggaaattttaatggtgaagaattgaaggttcttcaa
tttgatttttgtgggcgaagcatgacagatggtcttttgcagtctataaccactggtttt
cctttgttaactaatatttctattcgtggagcatactgtctttctgactctggactagat
tcactggtttcctctactccttcactgaggtctataaatttgagccaatgctctttcctt
agtgaagtgggtattcagactttagtggttaagttgggatctgtattgagggaattgtat
attgatgattgtgaccagttcgatgcaaaggcaatccttccgtcattaaagaagatagag
aatttggaagtactttcaattgtgggattgcaaaatgtttcggacagattcatcagtgag
ttgatgctgtctcatggttgttgcctgaaggagcttggacttgcccgttgcagagagttg
actgataagtccattgaatacatcgcagcgtattgcaatggattgcgtgctctcaacttg
gataacttgctgaagctaactgacttggccatcacctctcttacgcatggttgcacctca
tcactcgaaaagttgactctaggccatggtgttttcagcgatgaagcagtttccaccttt
gttgaaacacgtggaaattctttgaaggacctttcgctgagtggagttaagcaggctggt
gaacaaactgcattggccatgtcgagatgttgcacaaagaagttgcagaggctcgatgtg
tcatggtgccgggagatgacggatgaggctcttggtttgattgcggattcatgtttatat
ctgcaagagctgcgactatttggctgtactgaggttacagccaagtttctgaatggccac
tcaaatcctaatttgagaatcattgggatgaatgagcccttattcaattatcctccatcc
atgtgggaatctggtgaatactaccctaaccccctaccctcctccctcctctctctctct
ctctctctctctctctctcggaatagccactgctgtgaatga
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