KEGG   Amborella trichopoda: 18439529
Entry
18439529          CDS       T02990                                 
Name
(RefSeq) protein decapping 5 isoform X1
  KO
K18749  protein LSM14
Organism
atr  Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:atr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:atr03019]
    18439529
Messenger RNA biogenesis [BR:atr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     18439529
SSDB
Motif
Pfam: LSM14 FDF SM-ATX
Other DBs
NCBI-GeneID: 18439529
NCBI-ProteinID: XP_006849756
UniProt: W1PMU6
LinkDB
Position
Unknown
AA seq 592 aa
MGEPGPGTRAGGGSAADSYIGSLISLTSKSEIRYEGILFSINTEESSIALRNVRSFGTEG
RKKDGPQIPPIDKVYEYILFRGSDIKDLQVKSSPPVQTSQIHNDPAIIQSHYSHPTSVPT
SLASAGSGTSTDPSSQGSHLNLPSRSTFQGALPLYQPGGGPGSWGTSPAPPNANGSGLPM
PMYWHGHGYYGPSSGLPHLQQIQQPPSMPFRPPPGLPIPQSMQQQLQHPGFPSSLPTGSP
SLPEQTSSSAPLSAIATDLLATSAPSQLTSLASEIPTGLLLNKAPLTSLPPPTSTTSLPL
ISSVSTSVHEISAMVTPMSSKPRTVPVSSFPYQSISQPTSSVMGSSSTLGRSETSATSSL
VTGGPLLQNGPAVSSSTKQSLVGQKDVDVAAPPSSESVVDVQTPILPLPTPSDQKINGAF
GVPRPSNRGRERGRGHGNMHRPVTRFTEEFDFIAMNEKFKKDEVWGHLGKNKLQSKDKED
DEKDDDEVDGSDDDEDYGQASKLEIKPVYVKDDFFDSLSCNAIDRGSHNGRTKFSEQMKI
DTETFGNFPRFRGGRGAGRRGSPRGSHYGGRGGYGYGGRGRGRGYAALNQHM
NT seq 1779 nt   +upstreamnt  +downstreamnt
atgggggagcctggtcctggtacaagagcagggggtggctcggctgctgattcatacatc
ggaagcttgataagcttgacttcaaagtctgagatacgatatgagggcatattattcagc
atcaacactgaagaatccagcattgccttaaggaacgttagatcatttggaactgaagga
agaaagaaagatggtccccagatccccccaattgacaaggtttatgagtacatcctcttc
cgaggaagtgacatcaaggatttacaggtgaaatcttcaccacctgtccagacatcacag
atacataacgatcctgctattatccagtcccactattctcatccaacttctgtccccacg
agcttggcttctgccggaagcgggacatccaccgatcccagctcacaagggtcacatttg
aacctccctagtaggtcgacatttcaaggtgctcttcctttgtatcagcctggaggaggc
ccgggatcatggggtacttctcctgcccctccaaatgcaaatggttcaggccttcctatg
cccatgtattggcatggccatggatattatggaccttcaagtggactcccccatctacag
caaatacaacagccaccttctatgcctttccgaccacctcctggcttgcccattcctcaa
agcatgcaacaacagttgcaacatccgggcttcccttcgtccttgcctacagggtcaccc
agcttgcctgaacaaacaagttctagtgctccattaagtgccattgccactgatttgctt
gctacttcagctccctctcaacttacttcgttagcgtctgaaataccgactggcttattg
ttgaacaaggctcctcttacctctcttcctcctcctacctcgactactagtttgccatta
atttcttcagtgagtacctctgttcatgaaataagtgccatggtgacgcccatgtccagc
aagccaaggacagttccagtatcatcctttccctatcagtccatttctcagcctacgtcc
tctgtgatggggtcatcatcgacattggggcgctcagaaacatcagcgacatcctccttg
gtaactggtggcccactgttacaaaatgggcccgctgtatcttcatcgactaagcaatca
ttggtggggcagaaagatgtggatgttgctgcaccaccatcctctgaatcagtggttgat
gtccaaacgccaatattgcccctacctacgccgtcagatcaaaagattaatggagcattt
ggagttcctcgaccaagcaataggggccgtgagagaggcaggggacatgggaatatgcat
cgccctgttacccgcttcactgaagaattcgatttcatagccatgaatgagaagtttaag
aaagatgaagtttggggccatcttggcaaaaataagttacagtcaaaggacaaagaagat
gatgagaaagacgatgatgaagttgatggaagcgacgatgatgaagattatggacaagca
tcaaaactggagattaagcctgtttatgtcaaggatgacttttttgattctctatcatgc
aatgctattgatcgtggttcacataatgggaggaccaagttctctgagcaaatgaagatc
gacacagagacttttggcaatttccctcggttccgtggtggtcgtggtgctggacggcgt
gggagtcctcgcggttctcattatgggggaagagggggatatgggtatggaggtcgtggt
cgtggtcgtggttatgctgcacttaaccagcacatgtga

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