Amborella trichopoda: 18439659
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Entry
18439659 CDS
T02990
Name
(RefSeq) structural maintenance of chromosomes protein 4 isoform X1
KO
K06675
structural maintenance of chromosome 4
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
atr03036
]
18439659
Chromosome and associated proteins [BR:
atr03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
18439659
Condensin II
18439659
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_29
AAA_15
PUMA_CC
AlkZ-like
ABC_tran
Fic_N
Motif
Other DBs
NCBI-GeneID:
18439659
NCBI-ProteinID:
XP_020526509
LinkDB
All DBs
Position
Unknown
AA seq
1257 aa
AA seq
DB search
MSFYLSGVSATLTGVAMESDIPMTGAESPLTRRKEKPRLFIKEMVMKNFKSYAGEQRVGP
FHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLDSACVSVH
FQEIIDLEDEAYEPVAGSDFVITRVAFRDNSSKYYINERSSNFTEVTKKLRAKGVDLDNN
RFLILQGEVEQISLMKPKSQGPHDEGFLEYLEDIIGTNQYVEKIDESSKQLELLSEKRSG
VVQMVKLAEKERDNLEDGKNEAEAFMLKELVLLKWQEKATKLASEDAASHVVELQGKVSS
LEQNLKDEREKYKQNSKTLKDLEAVYNKYQKRHEELDSGLRTCKEEFKEFERQDVKYRED
LKHMKLKIKKLEDKIEKDSAKIKEVEKESEDSKELIPKLEVEITKLSQVLSEEEKILEEI
KESSKEEIEKYRSELLGVRVELEPWERQLIECRGKLDVASAESKLLKEKHAAGRKSFEDA
QLQMNDIKEKKRVKNADVQHIQTELDRYKVDASEARKEEQVCLKKEESLIPLEQAARQKV
SELSATLDSEKNQGSVLKAILEAKESKRIEGIHGRLGDLGAIDGKYDVAVSTACPGLDYI
VVETTASAQACVELLRRKNLGVATFMILEKQQNHLPMLKKKAQTPEGVPRLFDLIRAKDD
RMKLAFFAALRNTVVASDLNQATRIAYGDNGEFRRVVTLEGALFEKSGTMSGGGGKPRGG
QMGTSIRASVSGEAVANAEKELSELVEQLRSLRQRLGDLVRQYQASEKASSRLEMELAKA
RMEIDGLNAQYSDIEKQLDSLKAASHPRKDELERLAELDKTIAVEEKELERLLKGSKNLK
EKASELQNKIENAGGDRLKKQKSKVDKLQSDIDKSNTEINRCKVQIVTGQKTVKKLQKAI
EESIKEKDKVADDKDTKVAGFKEVEQKAFIVQQNYKKTQELIEKHKDVLEGAKEEYNKLK
KSMDVLRTAEVDIEDKLQDMKKLLKDWEMKGKGYTKRLEDINKDLNKHLDQIRIDGIDPA
KLEVALNDSTLAETCALERALENVALFEAQLKEMNPNLDSIQEYRRKASVYNERVEELNA
VTQERDDLKKQHDELKKKRLNEFMEGFNKISLKLKEMYQMITLGGDAELELVDSLDPFSE
GVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSI
VGHYVKDRTKDAQFIIISLRNNMFELADRLIGIYKTENCTKSITVDPMSFALQGGAA
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atgagtttttatttatcaggggtttctgcgacattaacgggagttgccatggaaagtgat
atccccatgactggtgccgagtcccctttgacccgtagaaaagagaaaccgaggcttttc
ataaaggaaatggttatgaagaatttcaaatcatatgctggggagcaaagagttggccct
ttccataagagcttttcagctgtagttggtcctaatgggagtgggaaaagtaacgttatt
gatgccatgctctttgtatttgggaagcgagctaaacagatgcgactgaacaaagtttca
gagttgatacacaactcaaccaatcaccagaatttggatagtgcatgcgtatcagttcac
tttcaggaaattattgatttggaggatgaggcttatgaacctgtggctggaagtgacttt
gtcattactagagttgcttttcgtgacaattcttcaaaatattatataaatgaacgatcc
agtaattttacagaggtcaccaagaaactgagagcgaaaggggtggacctcgacaacaat
cgctttctgattcttcagggagaggtggagcaaatctcactgatgaaaccaaagtcccaa
ggtcctcatgatgaaggatttttagaatacttggaggatattatcggaacaaaccaatat
gttgaaaagattgacgaatccagtaagcagctggaattgctcagtgagaaaagatctggt
gtagtacaaatggtcaaattggcagaaaaagagcgagacaatttggaggatggtaagaat
gaagcagaagcctttatgctcaaggagctagtgctcttgaaatggcaggagaaagctacc
aagttggcatctgaagatgccgcttctcatgtagttgagttacaaggaaaggtctccagc
ttggagcaaaatctcaaggatgaaagggagaaatataagcaaaactctaaaacattgaag
gatcttgaggctgtgtacaataagtatcaaaaaagacatgaggaacttgatagtggcctc
agaacttgtaaagaggaatttaaggagtttgaaaggcaggatgtgaagtacagggaagat
ttgaagcacatgaagctaaaaattaaaaaattagaagataaaattgagaaggattctgct
aaaatcaaggaagtggaaaaggagtctgaagattcaaaagagttgattccaaaacttgaa
gttgagataactaaattgtcacaggttctgtcagaagaagagaagattttggaagaaata
aaggagagctcaaaagaagaaatcgaaaaatatcgttcagaacttctgggggttcgtgtg
gagttggaaccttgggaaagacagttgattgaatgcagaggaaagcttgatgttgcttca
gctgaaagcaagcttttaaaagaaaagcatgctgctggtcgcaagtcgtttgaggacgcc
caacttcaaatgaatgatataaaggagaaaaaaagagtaaagaatgcagatgtccagcac
attcaaactgaattggatagatacaaagttgatgcctctgaggctcgaaaggaagaacag
gtttgtttgaagaaggaagaatcacttattcctcttgagcaagctgctcgacagaaagtt
tcagaattgtctgcaactctggattccgagaagaatcagggatctgttttaaaagcaata
ctagaagcaaaagagtcgaagcgaatagagggtatacatggtcgacttggagatctgggt
gcaattgatgggaagtatgatgttgctgtatcgacagcatgtcctggacttgattatatt
gtggtggagaccactgcttctgcccaagcatgtgttgagttgcttcgaaggaagaatctt
ggagttgcaactttcatgatattggagaaacaacaaaaccatctacctatgttgaagaag
aaagcgcaaacgcctgagggagttccacgcctctttgatctgataagggctaaggatgat
cggatgaagctcgctttctttgctgcattgaggaatactgtagttgccagtgaccttaat
caggctactcgaattgcatatggtgacaacggagaatttcgccgtgtggtgacattggag
ggtgctctttttgagaaatcagggaccatgagtggtggaggtggaaagcctagaggggga
cagatgggcacatctattcgagccagtgtttctggagaagctgtggcaaatgccgaaaaa
gagcttagtgagttggtcgaacagttgagaagcttacgtcaaagacttggtgatttggtg
aggcagtatcaggcctcagagaaggcttcatctcgtttagaaatggaattagcaaaagca
cgaatggagattgatggattaaatgctcagtattctgatatagagaaacagcttgattcg
ttgaaagctgcatcacatcctagaaaagatgaattggagagactggctgagcttgataaa
accatcgctgttgaagaaaaagagcttgaaaggcttctgaagggatctaaaaatcttaag
gagaaggcttctgagcttcaaaataaaattgaaaatgctggtggcgatcggctgaagaaa
caaaaatcgaaagttgataaacttcagtctgatattgataagtccaatactgagataaac
cgttgcaaggttcagattgtgactggtcagaaaactgtaaaaaaacttcaaaaggctatt
gaagagtcaataaaggagaaagacaaagttgctgatgataaagatacgaaggtagctgga
ttcaaagaggttgaacagaaggctttcatagtgcagcaaaactacaaaaagacgcaagag
ctcatagaaaaacataaagatgtgctggagggagccaaggaggagtacaataaactgaaa
aagtccatggatgtgttacgaactgccgaggtggatatagaagataaattgcaagatatg
aagaagctcttaaaagactgggaaatgaaaggaaagggctacacaaaaaggcttgaagat
ataaacaaagatctaaataaacatttagatcaaatcaggatagatggtatagatcctgca
aagctggaggttgccctaaatgacagcacgctagctgaaacttgtgctcttgaaagagca
cttgagaatgttgcattattcgaagcacagctcaaggagatgaacccaaacctggattcc
attcaagagtaccggagaaaagcctctgtatacaatgaacgtgtggaggagctaaatgct
gtgacccaggaacgtgatgatctgaagaagcagcatgatgaactcaagaaaaagcgattg
aatgaattcatggaaggattcaacaaaatatctctgaagttaaaggaaatgtaccagatg
atcacccttggaggggatgcagagttggagcttgtagactctctcgatcctttttctgaa
ggtgtggtttttagtgtccggcctcctaagaaaagctggaaaaatatcgctaatttatct
ggaggtgaaaagacattgagctcattagctctggttttcgcactgcatcactacaaacca
acaccgctttatgtgatggatgaaattgatgcagccttggattttaagaatgtgtccatt
gtgggtcactatgtgaaagaccgcaccaaagatgcccagttcataattataagtctgaga
aataatatgttcgagctagcggatagacttattggcatttacaaaacggaaaactgcacg
aagagcatcactgtcgatccaatgagttttgcgcttcaagggggagctgcttga
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