Amborella trichopoda: 18439742
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Entry
18439742 CDS
T02990
Name
(RefSeq) SWI/SNF complex subunit SWI3B
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
atr
Amborella trichopoda
Pathway
atr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
18439742
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atr03021
]
18439742
03036 Chromosome and associated proteins [BR:
atr03036
]
18439742
Transcription machinery [BR:
atr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
18439742
Chromosome and associated proteins [BR:
atr03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
18439742
PBAF complex
18439742
GBAF(ncBAF) complex
18439742
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
SWIRM-assoc_1
Myb_DNA-bind_6
Myb_DNA-bind_7
PhaP_Bmeg
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
18439742
NCBI-ProteinID:
XP_006849963
UniProt:
W1PUN3
LinkDB
All DBs
Position
Unknown
AA seq
495 aa
AA seq
DB search
MATETPGDVGAIKPENTPEKTLETSDSGHLPAVKPESSTFSESKERVFPITPQPLQLPFS
GVVTIPSHSRWFSWDKIHDTEHRMLPEFFDGKSVSKSPRVYKYYRDFIIKKYRESPSRKI
TLTEVRKALVGDVGTIRRVFDFLENWGLINYTPTKQIIRWEEKEKALGGSQYAAGAIRPL
GPPPGFVGASINGRIEASGKKENMRKWCTSCKLECSMVCFECQKADCITLCARCFVRGNF
RLGLLVSDFKRIELNQATKTDRWTDKDTLLLLEALLQYGDDWKSVAKYVGNKSEKECISR
FIKLPFGEQFVAPLELGEEELESENNAEGPTTNRSRLIPLADASNPIMAQAAFLSTLAGT
EVAAAAAEAAVTALYEVDSHSNQCSERIESFHQETAHRGAAANDSLPDLESIVAEARAKL
DEEEQSVEQSIASIVDVQMKEIHRKIKHFEELELQLERERAQVNHMEDLVYVEQLSFLQR
SLEKEKDQNVNAVAD
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggccactgaaactccaggcgacgttggtgccattaagccggaaaatacgccggaaaag
acgctggaaacctcagattccggccatttgccggcggtaaaaccagagagcagcaccttc
tctgaatccaaggaacgcgtctttcctataactccacagccattgcaacttcctttttca
ggagttgtgacgatcccaagccattcaaggtggttctcttgggacaagatccatgatacg
gagcataggatgcttccagagttctttgatgggaaatcagtctcaaaaagccctagggtt
tataagtattacagggacttcatcattaaaaaatacagagaaagtccatcaaggaaaatc
acattaactgaggttcgaaaggctcttgttggagatgtgggcacaattcgtagggttttt
gattttttagagaattggggtttgattaattacaccccaacaaagcaaattataaggtgg
gaagagaaagaaaaggctttgggtgggtctcagtatgcagcaggggcaattcgaccatta
ggccctccccctggttttgttggtgcctccattaatggccggattgaagcttctggtaag
aaagagaatatgaggaagtggtgcacaagctgcaagttagagtgcagtatggtttgcttt
gaatgccaaaaggctgattgcatcactctctgtgcaagatgctttgttcgtggcaacttt
cgacttggactcttggtgtcagacttcaaacgcattgaactcaaccaagcgacaaagaca
gatcggtggacagacaaagatactttgctccttttagaggcccttttacaatatggagat
gactggaaatcagttgcaaaatatgtgggtaacaagagtgagaaagagtgcatttccagg
ttcattaagcttccctttggcgagcaattcgtggcacctttggagttaggggaggaagaa
ttggaatccgagaacaatgccgagggccccacaacaaacagaagccgtctcattccactt
gcagatgcaagcaacccaataatggcacaggctgccttcttgtcaaccttggctggaact
gaagttgcagctgctgctgccgaagctgcagtcactgctctatatgaggttgatagccat
tccaaccaatgcagtgagagaattgaatcattccatcaagaaactgcacatagaggagct
gccgccaatgacagtctgcccgatcttgaatccatagttgcagaggctcgtgccaagcta
gatgaagaggagcaaagtgtagagcagtctatagccagcatcgtggatgttcagatgaag
gagattcatcgtaaaattaagcattttgaggaactggagttgcagttagaaagagaacgg
gcacaggtgaatcacatggaggaccttgtctatgttgagcagttgagttttttgcaaagg
agtttagagaaagaaaaggatcagaatgtcaatgcagttgctgattga
DBGET
integrated database retrieval system
