Amborella trichopoda: 18439755
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Entry
18439755 CDS
T02990
Name
(RefSeq) RNA polymerase I-specific transcription initiation factor RRN3 isoform X1
KO
K15216
RNA polymerase I-specific transcription initiation factor RRN3
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atr03021
]
18439755
Transcription machinery [BR:
atr03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
18439755
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRN3
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
18439755
NCBI-ProteinID:
XP_006849976
LinkDB
All DBs
Position
Unknown
AA seq
671 aa
AA seq
DB search
MGLELVSECPSSPLMSDGYASDSDTLSILGLWIRNALNSATESDFTKYMELVRKINDAEP
GNSEEEESLAFTLRALSQTTSSISRDHHLALISSIFSISIWNCARVVADSLLEFIINLAL
ANGGFVDECLDMLVRNFLPPACGLSHVVDSFTRRLMGQTNIANQHELLSKLMHQQLQRKE
EVLDLVHSALHKIASLVPTASLRLLPIIFNRMPHRVLLRDWNVLFVDNMLRLHRSAIGEF
IGNKLLMAVVDRLIEIDVEIGWEDILQDDPSKVLFDIELEGFEENDECHGKPGIEASHHF
RDASKHSLADVAEKMDCLMEVTFEHLRLCYTENHVDKVFETLLQSFQTTVLGTYKSKFTQ
FLLFYMCSLDPENCGAKFACLLVDIFVGKNHPPNTRMSAVAYLASYLSRGRFVSSSLVAS
TLKRLVDWCSEYCKIQDELRKPLNPATHRVFYSGCQAVMYVVCFRIGAIMEIPYLKSHIF
RPLESVLHHSLNPLKVCLPSIVEEFLRRTKVADVFTSLATAIVQNLLESENSRTFGGVER
LDMFFPFDPYLLKRSERFIRPNFIFWSMVQDDEDDDEFDLNGDDDDDVDECHDYDSSDVN
DDGDDIFMDGHMGSYQDEVIGSLNESEFDEFEYSMNKMSITPKSNINWGMPTRSPACDMP
ARIMPSTSPDW
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggggttggaactcgtctcagaatgtccgagctcgccactgatgtcagatggttatgca
agcgattcagacactctctccattcttggtttatggatcaggaatgctctaaattcagct
actgagagtgattttaccaaatatatggagcttgtcagaaagatcaacgatgcagaacct
ggcaatagtgaagaggaggagtccctcgcgtttacactaagggcactgtcacagacaacc
tcatcaattagccgtgaccaccatctagctcttatttcctctattttctcgataagcata
tggaactgtgcgcgcgttgtggcagattcattgctggaattcatcatcaatttggcattg
gcaaatgggggttttgttgatgaatgcttggacatgttagttaggaactttctacctcct
gcatgtggattgtcacatgtggtagatagtttcactaggcgtttgatgggacaaacaaat
attgccaaccagcacgagctgctctcaaaattaatgcatcaacaacttcaaaggaaggaa
gaagtccttgacctggttcattcagctttgcacaagatagccagtttggttcccacagct
tctttgaggttgctgcctataatcttcaatagaatgcctcaccgtgtactccttagagat
tggaatgtgctctttgtagataatatgctaaggcttcaccgcagtgctatcggtgaattt
attgggaacaaactgctgatggcagtggtggataggctcatagagattgatgtagaaata
ggatgggaagatattctacaggatgaccctagcaaagtcttatttgatatagaactggaa
ggttttgaggaaaatgatgaatgccatggaaaacctggcattgaggccagccatcatttt
cgagatgcaagtaagcatagtttggcagatgttgctgagaagatggattgccttatggag
gtcacttttgagcaccttagattatgttatactgaaaaccatgttgataaggtttttgag
actcttcttcagtccttccaaactacagtattgggcacctacaagtcgaaatttactcag
ttccttttgttctacatgtgctcgcttgatccagaaaattgtggtgccaagtttgcatgt
cttcttgtggacatatttgtgggcaagaatcatcctccaaacacaaggatgagtgcagtt
gcttatcttgccagctatctatcacgaggaagatttgtctcatcttctttagttgcaagc
acattgaaaagattggtggactggtgttcggagtactgtaaaattcaggatgagctgagg
aaacccttaaacccagcaactcatcgggtcttttactcaggatgccaggctgtgatgtat
gttgtttgctttcggattggagcaattatggagatcccatacctcaagtcacacatattc
cggcccctagaatctgttctgcaccattcactgaatccattgaaggtttgtttgccctcc
atagtggaggaattcctaaggcggaccaaagtggccgatgtgtttacttctttggctact
gccattgtccaaaacttgcttgaatccgagaattcgaggacatttggtggtgtagagaga
cttgatatgtttttcccctttgatccgtaccttcttaaaagatcggagaggtttattagg
ccgaatttcatattctggtccatggttcaagatgatgaagatgatgatgagtttgatctc
aatggtgatgatgatgatgatgttgatgaatgtcatgattatgatagtagtgatgtcaat
gatgatggtgatgatatattcatggatggtcacatgggatcataccaagatgaagttata
ggtagtctaaatgagtctgaattcgatgaatttgaatactcgatgaacaaaatgtccata
actccaaagagtaatattaactgggggatgcccactcgaagtcctgcttgtgacatgcct
gcaagaatcatgccttctactagccctgattggtga
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