Amborella trichopoda: 18439936
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Entry
18439936 CDS
T02990
Name
(RefSeq) coatomer subunit beta-1
KO
K17301
coatomer subunit beta
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atr04131
]
18439936
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
atr04147
]
18439936
Membrane trafficking [BR:
atr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
18439936
Exosome [BR:
atr04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
18439936
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
Coatomer_b_Cpla
Coatamer_beta_C
HEAT_2
Cnd1
Coatomer_g_Cpla
Alpha_adaptinC2
Motif
Other DBs
NCBI-GeneID:
18439936
NCBI-ProteinID:
XP_006850154
UniProt:
W1PWK8
LinkDB
All DBs
Position
Unknown
AA seq
953 aa
AA seq
DB search
MEKSCSLLIHFDKGTPALANEIKEALEGNDLSLKIEALKKAIMLLLNGETLPQLFITIVR
YVLPSEDHTVQKLLLLYLEIIDKTDSKGKVLPEMILICQNLRNNLQHPNEYIRGVTLRFL
CRLSETELIEPLIPSVLANLEHRHAYIRKNAILAIMSIYKLPQGEQLLVDAPEMMEKTLM
SEQDPSAKRNAFLMLFTCAQDRAVNYLLSHLDSVPQWNELLQMVVLELIRKVCRANPGEK
GKYIKVIISLLNSPSTAVIYECASTLVSLSSAPTAIRAAANTYCQLLLSQSDNNVKLIVL
DRLNELKISHREVMMDMIMDVLRALSSPNVDIRRKTLDIALELITPRNIDEVVLTLKKEV
MKTQSGELEKNGEYRQMLVQAIHSCAVKFPEVASTVVHLLMDFLGDTNVASAMDVVLFVR
EIVETNPKLRVSIITRLLDTFYQIRASRVCSCALWIIGEYCLSLSEVESAISTIKQCLGD
LPFYTATEEGEGGVDSKGSNANRTQQATSITVSSRRPAILADGTYATQSAASETAFSAPT
LVQGSLASPGNLRSLILTGDFFLGATVACTLTKLVLRLEEVQPSKAEVNKVSVGALLVMV
SMLQLGQSSFLPHPIDNDSYDRTILCIRLLCSTGDEVRKVWLQSCRQSFVKMLADKQFRE
IEEIKAKAQISHAQPDDLIDFYHLKSRKGMSQLELEDEVQDDLKRATGEFTKDGDDTNKL
NRILQLTGFSDPVYAEAYVTVHQYDIVLDVTIINRTKETLQNLCLELATMGDLKLVERPQ
NYTLAPESSKQIRANIKVSSTETGVIFGNIVYETSNVLDRTVVVLNDIHIDIMDYISPAS
CADVQFRNMWAEFEWENKVAVNTVIQDEKEFLDHIVKSTNMKCLTPLSALEGDCGFLAAN
LYAKSVFGEDALVNVSVEKTPNGKLSGYIRIRSKTQGIALSLGDKITLKQKGG
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atggagaaatcgtgtagccttttgatccattttgataagggaacccctgccctagctaat
gagatcaaggaagccctagaaggaaatgatctttcccttaagattgaagctctaaaaaaa
gcgatcatgcttttgctcaatggagaaaccctacctcaattgttcatcaccattgttcga
tatgttttgccctccgaggatcatacagttcagaaactccttctcctgtatctcgaaatc
atcgataagactgattctaaagggaaggtcttacctgaaatgatcctgatctgtcaaaac
ctcaggaacaatcttcaacacccaaatgaatacatcaggggtgttaccctccgatttcta
tgtcgattatctgaaaccgagctcattgagccattgattccctctgttcttgcgaatttg
gagcatcgccatgcttatattcgtaaaaacgcgattttggctataatgtcgatctataag
ctccctcaaggggagcagctcttggtcgatgcaccagaaatgatggagaaaacacttatg
tcagagcaagacccaagtgcaaagcgaaatgcatttctcatgcttttcacttgcgctcaa
gatcgagcagtgaattatcttctctctcatcttgatagtgttccacagtggaatgagctc
cttcaaatggtggttttggagctgattcgtaaggtttgtagagcaaatccaggtgagaag
gggaaatatattaaggtgatcatatctctcctcaattctccttcaactgctgttatttat
gagtgtgctagtacacttgtttctctctcatctgcccctactgccattagagcagctgcg
aatacatattgtcagttgttgctctcccagagtgataacaatgtgaagcttatagtgctc
gatcggcttaatgagctcaaaatctcacatagagaggtcatgatggatatgataatggat
gttctcagagctctttcgagccccaatgttgatattcgaaggaaaacacttgatatagcc
ttagaattgatcactccgagaaacattgacgaggttgttctcactctaaagaaggaggtc
atgaaaactcagagtggggagctcgagaagaatggggaatataggcaaatgctggttcaa
gccatccattcatgtgctgtgaagttccctgaggtggcgagcacagttgtgcatttgttg
atggatttcttaggcgacaccaatgttgcttccgccatggatgtggttttgtttgttcga
gagatagtcgagaccaacccaaaacttagggtctccataataaccaggcttttggatacg
ttttatcagatccgagcttccagggtttgctcctgtgctctttggataattggggagtat
tgcctctctctatctgaagttgagagtgccatctcgacaatcaagcaatgccttggggac
ttgccattttacactgcaacagaagaaggagaaggtggggtggattcaaaaggctcaaac
gctaaccgaacgcaacaggcaacctccattactgtatcttctcgaaggcctgcaattctg
gcagatggaacttatgcaacgcaaagtgctgcttctgaaactgctttctcagcacccaca
cttgtccaaggatcattggcctctcctggtaacctgaggtcattgattcttactggggat
ttctttcttggggcaactgtggcatgtacattgaccaaacttgtccttaggttagaagag
gtgcaaccatccaaagccgaagtgaataaggtttcagttggggccttattggtcatggtc
tcaatgctccaattgggtcaatcttcatttctccctcaccccattgataacgattcctat
gataggaccattctttgcataaggcttttgtgtagtactggtgacgaggttcggaaggtg
tggctgcaatcgtgtcgccagagctttgtgaagatgcttgcagataagcagttccgagaa
atagaggagatcaaggcaaaggcccagatatcacacgcccaaccggatgatctcattgac
ttctaccatttgaagagtaggaagggcatgagtcagcttgaactagaagatgaagtgcag
gatgatctgaagagagccacgggagagttcacaaaggatggggatgataccaacaaattg
aaccgcatccttcaactcacaggtttcagcgaccctgtctatgctgaagcatatgtaact
gttcaccaatatgacattgtattggatgtcacgatcattaatcgaacaaaggaaaccctt
caaaacctgtgcttggaactcgcaaccatgggtgatctcaagctagtcgagcgaccccag
aattacaccctcgccccagaatcgagcaagcagattcgtgccaacataaaagtttcttcc
actgaaacaggggtcatatttggaaacattgtgtatgagacatccaatgtgcttgatcga
actgttgtggtccttaatgatatacacattgacatcatggactatatttctcctgcaagt
tgtgctgatgtgcaattcagaaacatgtgggccgagtttgaatgggagaacaaggtagct
gtgaacactgtgattcaagatgagaaggaatttctggaccacattgtcaagtcgacaaac
atgaaatgcctcacaccattgtctgcgctggaaggagattgtggatttttggcagctaac
ctctatgcaaagagcgtgtttggggaggacgccctcgtgaatgttagtgtggagaagacg
ccaaatgggaagctgagcgggtacataagaataaggagcaagactcaagggatagccctt
agtctaggggacaagatcactcttaagcagaagggtggttaa
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