Amborella trichopoda: 18440315
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Entry
18440315 CDS
T02990
Name
(RefSeq) protein CHROMATIN REMODELING 24 isoform X1
KO
K20093
DNA excision repair protein ERCC-6-like [EC:5.6.2.-]
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
atr03036
]
18440315
Chromosome and associated proteins [BR:
atr03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
18440315
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
AAA_34
ResIII
HDA2-3
Motif
Other DBs
NCBI-GeneID:
18440315
NCBI-ProteinID:
XP_006850532
LinkDB
All DBs
Position
Unknown
AA seq
1019 aa
AA seq
DB search
MERRTPRSLNQRNAQLLEDLANKTSGIPPTSEKANALHCGEMVNKVKLKGRRRLCKLSSR
DENSDSYGENTVSEDATSSAIDEPSDIRSILNDLSSKLDSLSIEKSSMYLKKQYKSDSLG
LINIYDSPESGSLQSENDRSVKDAAVEPSSTNHTDRKLPATKTGKRVDLDGGFSFSLVSD
DDQPTQGRGHNDEDDDGDSFRSTTSSPLLDQVGSSSSGDASKSSASESILVNLSDDDEDE
EYYRCRSAESQFEDPVEDAEPVMFSNGSETCKLSGNIAKMLYPHQRDGLKWLWSLHCKKT
GGILGDDMGLGKTMQVAAFLSGLFASSLIKRVLIVSPKTLLQHWIRELSTVGLSGRIREY
FGSSTSSRQYELKYILQVGGILLTTYDIVRNNSKSLKGDYYQIDNHDEEDGSTWDYVILD
EGHIIKNPSTQRAKSLLEIPCAHRIIISGTPIQNNLKELWALFNFCCPEILGDKKEFKER
YEYAILRGNEKNASDREKQIGSTVARDLRERIKPYFLRRLKSEVFVDNGNTNTSKLSKKH
ELIIWLRLSQNQRQLYEAFLESEMVTSSFDDKKKKKSSFGASALSALTVLKKICDHPSLL
TKRATDDILEGMEKLLNKDDLYRVDEMASHLAKMMSSQSGDKLQSNVSCKISFLIALLEN
MIAEDHSVLIFSQTRKMLDIVQEAIGSKGYSFLRIDGTTKPSERERLVQEFQEGLGAPIF
LLTSQVGGLGLTLTRADRVIVVDPAWNPSMDNQSVDRAYRIGQFKDVLVYRLMTCGTIEE
KIYKMQVFKGGLSKIATEHKEQTRYFSQRDLRELFSLPPQGFDVSLTQLQLEEEHGSDHV
MEASLSDHIEFLESLGIAAVSHHSLLFSKAATSLALRQEADILPCRGTMYMGHSSARSFS
DSVPAGKEDALNPKHWKYPDTNSPIVASKAVHAERLKEAIKRLYQTLDNEAIISKLPDKG
ENLHRKIKVLESELDTIEKSDMNHDHKKGKANPSNTPDVVNIDDISDVLQKLSVERKRE
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atggagcggagaacccctcggagtcttaaccagcggaacgcccaactccttgaagaccta
gcaaacaagacctctggcataccacccacttcagagaaagccaatgctctgcactgtggg
gaaatggtgaacaaggttaaactgaaagggaggcgtcgcctctgcaaactctcatcaagg
gatgagaactcagattcttatggggaaaacacggtatcagaagatgctacctcttccgct
attgatgaaccttctgatatcagatccattctcaatgatctgagctcgaaactggactct
ctatccattgagaagtcatctatgtacttgaagaagcaatataaaagtgattccctggga
cttatcaacatatatgatagtcctgagagtggttccttacaatcagaaaatgatcggtca
gttaaggatgcagcagttgaacccagctccacaaatcataccgatcgaaagttacctgca
acaaaaacgggcaaacgagtggatttggatggaggtttcagtttttctttagtttcagat
gacgatcaaccaacacaaggacgtggtcacaatgatgaagatgatgatggtgattccttt
cgctctaccacttcatcccctctccttgatcaagtgggttccagttcatcaggggatgcg
agcaaaagctcagcttcagagtctatcctggttaatctctctgacgatgatgaagatgaa
gaatattataggtgcaggtcagctgaatctcaatttgaggaccctgttgaagatgcagag
cctgtcatgtttagtaatggctccgagacttgtaaactcagtggaaatattgcaaagatg
ctatacccacatcagcgcgatggtctgaaatggttgtggtcacttcactgcaagaagaca
gggggaattttgggtgatgacatgggcttggggaagacaatgcaggtagctgcctttttg
tctggattgtttgcatcgagcttgattaaacgtgtgttgattgtgtctcccaaaaccctt
cttcaacactggatcagagaattatcaacggtgggactttctggaaggattagagagtac
tttggaagttctacaagttctcgtcaatatgaacttaaatacatacttcaggttggaggc
attcttctcacgacttatgatattgttagaaacaattcaaaatcgttaaaaggtgattat
taccaaattgacaatcacgacgaagaggatggaagcacctgggattatgtaatacttgat
gagggtcatatcataaagaacccaagtactcaaagggcaaaaagtttgcttgagatacca
tgtgctcatcgcattattattagcgggacacctatacaaaacaacttgaaggaactttgg
gccttgttcaacttttgttgccctgaaattttgggtgacaagaaagagtttaaagaaaga
tatgagtatgccatactccgtggaaatgaaaaaaatgcttccgaccgtgaaaaacaaatt
ggttccacagttgcaagggatttgcgagaaaggatcaagccttatttcttgcgtcgttta
aaaagtgaagtatttgttgacaatggaaacactaatacctcaaaactttctaaaaaacac
gagttgatcatatggttgagattgagccaaaatcagaggcaactatatgaagcatttttg
gagagtgagatggtcacatcatcatttgatgacaagaagaaaaaaaaatcatcgtttggt
gcatcagcattatctgctttgacggtactgaaaaagatatgcgatcatccatctttgttg
accaaaagggcaacggatgatatattggaaggaatggagaagttgcttaataaggatgat
ctttacagggtggatgaaatggcttctcatttagcaaaaatgatgtcctcacaaagtggt
gataagttgcaaagcaatgtctcatgcaagatttcctttttgattgctttactggagaac
atgattgcagaggatcacagtgttctaatcttttctcaaacgcgtaaaatgctagatatt
gtgcaggaagctattggatcaaaaggttattctttcttacgtattgatggaaccacgaag
ccttctgaaagagaaaggcttgtccaggaatttcaagagggtttaggtgctcctattttc
cttttgacatctcaagttggaggacttgggcttactcttactagagcggatcgagtaatt
gttgttgatccagcttggaatccaagcatggacaaccaaagtgttgatcgtgcgtatcga
attgggcaattcaaagatgtccttgtctatcggttgatgacttgtggcaccatagaagag
aagatatataaaatgcaagttttcaaaggaggcttgtccaaaattgcaacagagcacaaa
gaacagactagatatttcagccagagagatctccgagagcttttcagccttccaccacaa
ggatttgatgtttcacttacacaactgcagttggaagaagagcatggaagcgatcatgta
atggaggcttctttgagtgaccatattgagtttctcgaaagcctaggaatagcagcagtc
agtcatcacagtttgctgttctcgaaggccgcgacttctctggcattgagacaagaagct
gacattctaccctgtagaggcaccatgtatatgggacactcttcagctcgctctttttca
gactctgttccagccgggaaggaagatgccttaaacccaaagcattggaaatatcccgac
acaaattcccctattgtagctagcaaggcagtgcatgctgagcgcctcaaagaagctatt
aaaaggttatatcaaactcttgataacgaggctatcatttcaaagttgcctgacaaagga
gagaatctgcatagaaagataaaggtactggagtcagaacttgatacaattgagaaatct
gatatgaaccatgatcataagaaagggaaggcaaatcctagcaatactccagatgtcgtc
aacatcgatgatatatcagatgtgcttcaaaagttatcggttgaaaggaagagagagtag
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