Amborella trichopoda: 18440722
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Entry
18440722 CDS
T02990
Name
(RefSeq) notchless protein homolog isoform X1
KO
K14855
ribosome assembly protein 4
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
atr03009
]
18440722
Ribosome biogenesis [BR:
atr03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
18440722
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
EIF3I
WDR55
DSE1_N
Beta-prop_Aladin
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_WDR36-Utp21_1st
ASA1
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_WDR19_1st
CFAP251_N
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_IFT140_1st
Beta-prop_DCAF4
NLE
Beta-prop_DCAF12
Beta-prop_WDR41
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_NOL10_N
eIF2A
Beta-prop_VPS8
PD40
Ge1_WD40
Tricorn_2nd
Beta-prop_NUP159_NUP214
Tricorn_N
RMC1_N
PAC11
TRM82_WD
Beta-prop_WDR75_2nd
WDR54
DUF4747
Motif
Other DBs
NCBI-GeneID:
18440722
NCBI-ProteinID:
XP_006850923
LinkDB
All DBs
Position
Unknown
AA seq
495 aa
AA seq
DB search
MEDEGGELSRMKERNGGTDDNTVLPDQEKGNNLLCLLTDPEGTPLGLPLYLPQDAGPAQL
QDLVNTLLHNEEKFPYAFYVSDQQLSMQLGSYLQKNKVSVEKALHIVYQPQAIFRIRPVN
RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRFWDLNTQTPLYTCSGHKNWVLCIAW
SPDGKHLISGSKDGELRSWDPLTGNPSGNPLKGHKKWITGIFWEPVHLQAPCRRFVSSSK
DGDARIWDIVSRKCVMCLSGHTLAVTCVKWGGDGLIYTGSQDCIIKVWETTQGKLIRELK
GHGHWVNSLALSTEYVLRTGPFDHTGKKYGSPEQMKEAALERYTKMKGSFPERLISGSDD
FTMFLWEPTVSKHPKARLTGHQQLVNHVYFSPDGQWVASASFDKSVKLWNGHTGKYVASF
RGHVGPVYQICWSADSRLLLSGSKDSTLKVWDMKTQKLREDLPGHADEVFAVDWSPDGEK
VVSGGKDRVLKLWMN
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgaaggaggagaattatctaggatgaaagagcgaaatggcggtactgatgac
aacactgtgttacctgatcaagaaaaaggaaacaacttgctttgcttgttgactgatccc
gagggaactccattagggcttcccttgtatcttccacaggacgctggaccagctcagcta
caggatctcgtcaatacactccttcacaatgaggagaaatttccttatgccttttatgtg
tcagatcaacaactttccatgcaacttgggtcttatttacagaaaaacaaagtttctgtg
gagaaagcgctgcacatagtttaccaacctcaagcaatttttcggattcgtccagtcaat
cgatgttctgcaactattgctggtcatactgaggctgtcctttctgtggcatttagccct
gatggacggcaactggctagtggttctggtgacactactgttcgcttctgggatcttaat
actcagacccctctatacacgtgttcagggcacaaaaattgggttctctgcattgcatgg
tcacctgatggaaagcatcttataagtggtagcaaggatggagagcttcgaagctgggac
cccttgactggaaacccttcaggcaatccacttaaaggacataagaaatggattactggg
attttttgggagcccgtacatcttcaagctccatgtcgccgttttgtgagttcgagtaaa
gatggagatgcacgtatatgggacattgtatcgaggaagtgtgtcatgtgtctcagtggc
cacacacttgcagtaacctgtgtgaagtggggcggagatggattgatatatactgggtcc
caggattgtataatcaaagtatgggaaactacccaaggaaaactgattcgtgagctcaag
gggcatgggcactgggttaattctcttgcattgagcaccgaatatgtccttcgaacaggc
ccatttgatcatactgggaaaaagtatggttctcccgagcaaatgaaagaggctgctcta
gaaaggtacactaaaatgaaagggagttttcctgaaagattgatttcgggctcagatgat
tttaccatgtttctatgggaaccaactgtaagcaagcaccctaaagctcgtttgactggt
caccaacagcttgttaaccatgtttacttctctcctgatggacaatgggtggccagtgcc
tcatttgacaagtctgtcaagttgtggaatggtcacacagggaagtatgtggcatctttc
cgtggacatgtggggcctgtttaccagatatgctggtctgcagatagtaggcttttgttg
agtggaagcaaggattccaccctcaaggtttgggacatgaagacacaaaagttaagagag
gatctcccaggccatgcagatgaggtttttgctgttgattggagtccagatggtgagaag
gtggtatctggtggcaaggatagagtacttaagctatggatgaattga
DBGET
integrated database retrieval system
