Amborella trichopoda: 18440723
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Entry
18440723 CDS
T02990
Name
(RefSeq) pumilio homolog 5
KO
K17943
pumilio RNA-binding family
Organism
atr
Amborella trichopoda
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PUF
PUF_NOP9
NABP
DUF445
Motif
Other DBs
NCBI-GeneID:
18440723
NCBI-ProteinID:
XP_006850924
UniProt:
W1PYD1
LinkDB
All DBs
Position
Unknown
AA seq
1003 aa
AA seq
DB search
MATENPMILVGSGREKKWLPNKDTSLATSPPNSLAAQELGLVLKGNRYPGNGKDDVPNRS
GSAPPSMEGSFAAIGSLWHSQSSNTEVGWGASNDALQNYDSEEQLRSNPAYSDYYASNIN
LNPRLPPPLMSGDKRRLAHHLGGFRDNRRLMSFDDSSNVSLRNSRGVLPTHEEESEEDRS
PVGNLVRQIPSDWTGSSSEFFSEQYVNSLGARHKSLVDLIQEDFPRTPSPVYNQSRSANE
EGSPSLGAHAVGSAPSSEPSPSPDITVMTSQAGLQGDSTSEFTGLVSELSTGSAHFEDAP
LVCSRADSDVTGMEAALKGLNLSETHKTENLKRHQERRQPQQSNLQQRRMHQQRTHAPIS
QGQATPLPPLSQGLHRQFSGFDQSFQGQTNFSSPNMAPTVEVQPVVQSGGVTPHLYAAAS
AYMASGNPLYHNLQPSIYAPQYGLGAYAFNAALIPPVMAGYPSHGAIPMAFDNSGSTTFN
VPSASASTGGNGSPGSDIYKFNGPLGVALPSSFPDPHYMHYLQHPSEDAYSFGAQYDPNV
GRGGGFGSQRDVFESQSQKSQFLRSGALGGAMSPRKGGFSSPSYYGSPPNMSLLMHYPTS
PLASPVYPGSPMAVTSIPGRSNENFRFPLGTNRTAGSYSGWQGSRINEKLDDQKAFSFLE
ELKSSKARRELPEITGHIVEFSADQHGSRFIQQKLETCSPEEKESVFQEVLPHASSLMTD
VFGNYVIQKFFEHGSSEQRRKLADQLVGQVLTLSLQMYGCRVIQKALEVVDLDQKTQLVQ
ELDGHVIRCVRDQNGNHVIQKCIECVPTEKIEFIISAFRGQVVTLSTHPYGCRVIQRVLE
HCTNEQQTQCIVDEILESVCVLAHDQYGNYVTQHVLEKGTPHERSQIISKLNGQVVQMSQ
HKFASNVIEKCLEYSDPAERDHLIDEIVGHTEGNDNLLIMMKDQFANYVVQKILETCNDQ
QREILLDRIRVHLNALKKYTYGKHIVARVEKLLYVGESHGLEA
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atggcaactgagaatccaatgatattggtgggaagtggcagagagaaaaaatggcttcct
aataaggacacttcattggctacttcccctccgaacagtctagcagcccaagagttgggt
ttggtcttgaaaggtaatcgataccctggaaatgggaaggatgatgtcccaaatcgaagt
ggaagtgcacctccaagtatggaaggttcatttgcagcaattggaagcctctggcattca
caaagttctaatacagaggtgggctggggtgcttccaacgatgcactccaaaactatgat
tcagaggagcaacttcgatccaatcctgcttactcagattactatgcctccaatattaat
cttaatccaaggcttcctccacctcttatgtcgggggataaaaggcggcttgctcaccat
cttggtggttttagagataataggagattgatgtcttttgatgatagtagtaacgtgtca
ctacgtaattctcgtggagtacttcctacccatgaagaagaatctgaagaggatagatcg
cctgttgggaacctggttcgacagataccaagtgattggacaggaagcagtagcgagttt
ttctcagaacaatatgtgaattcattaggtgctcgccataaaagtctggtagacttgatt
caggaagattttcctcgtaccccgtcacctgtttacaatcaatcccgttcagctaatgag
gaaggttcaccttctcttggtgcacatgctgttggttctgcaccgagtagtgaaccttcc
ccatctcctgatatcacggttatgacttcccaagcagggcttcaaggggattcaacaagt
gaatttactggtttagtcagtgaattaagcactggaagtgctcattttgaagatgctccc
ttggtttgttctagggctgattctgatgtcactggcatggaagctgcactcaaagggctc
aatctatctgagacccacaaaaccgagaaccttaaaaggcatcaagagaggcgacagcct
caacagagcaatttgcagcaacgtcgcatgcatcagcagcgaacccatgctcccatatcg
caaggccaagctacaccattgccaccactctcccaaggattgcacaggcagttcagtggt
tttgatcagtctttccaaggccagaccaatttctcctctcccaatatggcacccacagtt
gaggtccagcccgttgttcaatctggtggggttactcctcatttgtatgcagctgcatca
gcttatatggcatctggaaatcccttgtatcacaacttacagccaagtatatatgctccc
caatatggtctcggtgcatatgcttttaatgctgctcttatacctccagttatggctgga
tatccttctcatggtgctattcctatggccttcgataattctggaagtacaacctttaat
gttccctctgctagtgcatcgactggtggaaatgggtcacctggatctgatatatacaag
tttaatggaccgcttggtgtagctttgccatcctcttttcccgatcctcattatatgcac
tatttacaacatccttctgaggatgcttatagttttggagctcagtatgatcctaatgtt
ggtagaggaggtggttttggaagccaaagagatgtctttgaatctcaaagtcaaaaatcc
cagtttctaagaagtggagcccttggtggtgccatgagcccaagaaaagggggcttctcc
agtccaagttattatggaagtccaccaaacatgagcctcttaatgcactatccaacatcc
ccccttgcaagtcctgtatatccaggttcaccaatggctgtgacgagcattccaggaagg
agcaatgagaatttcaggtttccattgggcactaacagaactgcaggatcatattctgga
tggcaagggtcccgaatcaatgaaaagcttgatgaccaaaaggctttttcttttcttgaa
gagctaaaatccagtaaagctcgcagagagttacctgaaattactgggcatattgttgag
ttcagtgctgatcaacatgggagtcggtttattcaacagaaattagaaacctgcagtcct
gaggaaaaggagtctgtctttcaagaggtccttccacatgcttcgtcattaatgacagat
gtgtttggaaactatgttattcaaaagttttttgagcatgggagctctgagcaaaggaga
aaacttgcagaccagcttgtaggccaggttcttacattgagtcttcagatgtatggttgt
cgtgttattcaaaaggccctcgaagtagttgatctggaccagaaaactcagcttgtccaa
gaactcgatgggcatgttattcgatgtgtgcgtgaccaaaatggaaaccatgtgattcag
aaatgcattgaatgtgtgcccacagagaaaatcgagttcattatatcagcttttcgaggt
caagttgtaactctttcaacacatccttacggttgccgtgttatccagagagttctggag
cactgtacaaatgaacagcaaactcagtgtatagtggatgagattctggagtctgtttgt
gtgcttgcacatgatcaatatggcaactatgttacccagcatgtattagagaagggtaca
cctcatgaaagaagtcaaattattagcaaattgaacgggcaggtcgtacagatgagccaa
cataagtttgcatccaatgtcatcgagaaatgtttggaatacagtgatcctgcagaacgt
gaccatttaattgatgaaatagttggacatactgagggaaatgataatttactgataatg
atgaaggatcaatttgcgaactatgtggtccaaaagatacttgaaacatgcaatgatcaa
caacgagaaatactgcttgatcgtattagagttcatttgaatgctttgaagaagtacact
tatgggaaacacatcgttgctcgggtagagaaacttctatatgttggagaatcccatggt
ttggaagcataa
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