Amborella trichopoda: 18440745
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Entry
18440745 CDS
T02990
Name
(RefSeq) isoamylase 1, chloroplastic
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
atr
Amborella trichopoda
Pathway
atr00500
Starch and sucrose metabolism
atr01100
Metabolic pathways
atr01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
18440745
Enzymes [BR:
atr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
18440745
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SSDB
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Paralog
GFIT
Motif
Pfam:
ISOA1-3_C
Alpha-amylase
CBM_48
GHL10
Motif
Other DBs
NCBI-GeneID:
18440745
NCBI-ProteinID:
XP_006850946
LinkDB
All DBs
Position
Unknown
AA seq
800 aa
AA seq
DB search
MVSSRSLSCLGSSLSCDICPKKWRSYSTVTYFRPCGWRFEQKQVSFPRKRHNLAIMNENG
AGDDSERVKGEPSTVVIERPPRFNILKGKPWPFGATYRDGGVNFALCSNGASSVTLCLMS
LSDLQENKTSEQIYLDPLINKTGDVWHIFLMGNFEDMLYGYRVDGEFFPEKGHFFDSLKI
LLDPYAKAVVSRGEYGVPGPGGDCWPQMAGMVPSPKNDFDWEGDLPLRLPQKDLIIYEMH
VRGFTKHDSSEANFPGTYRGMVEKLDHLEELGINAIELMPCHEFNELEYYSYNPVLDDHK
VNFWGYSTVNFFSPMMRYSSSGMQNCGRDAINEFKLLVREAHKRGIEVIMDVVFNHTAEG
NEKGPTFSFRGLDSCVYYMLAPKGEFYNYSGCGNTVNCNHPVVRQFIVDCLRYWVTEMHV
DGFRFDLASIMTRSCSLWDAANAFGSPIEGHSITTGTPLSNPPLIDLISNDPVLNGIKLI
AEAWDAGGLYQVGGFPHHGVWSEWNGQYRDIVRQFIKGTDGLSGVFAECLCGSPQLYQGG
GRKPWNSINFICAHDGLTLSDLVSYNEKHNSANGEGNNDGEDHNNSWNCGQEGEFASLPV
QRLRKRQMRNFFLCLMVSQGTPMIFMGDEYGHTKGGNNNTYCHDSYINYFRWDKKEDASS
DFFRFCRLMTKFRRECESLGLDDFPTGERLQWHGHSPGVPDWSESSRFVAFSLMGSIEGE
IYVAFNTSHLPVTIELPERPGYRWEPLVDTSKPSPYDFLSADLPDRTTAIQQYDHFLNSN
IYPLLSYSSIILTLAPDDNS
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atggtttcatcaaggagcctttcatgcttgggttcctctctttcctgtgatatttgtccg
aagaaatggaggagttattctacagtcacatattttaggccatgtggatggagatttgag
caaaagcaggtttcatttcccagaaaaagacataatctggctataatgaatgagaatggg
gctggggacgattctgagagagttaaaggggaaccgtccacagttgtgattgagaggcct
ccaagattcaatatattaaaagggaaaccttggccctttggtgctacttatagggatggt
ggtgtgaattttgccttgtgttcgaatggagcttcctctgtgactctttgtctgatgagc
ctttctgacttacaagagaataaaacgagtgaacagatctaccttgatccactgataaac
aagactggggatgtttggcatatatttcttatgggaaatttcgaggatatgctctatggt
tatagagttgatggggagtttttcccggagaaggggcatttcttcgactcattgaaaatt
ttattggatccctatgctaaggcagttgtaagcagaggagagtatggtgtccccgggcct
ggaggagattgttggccccaaatggctgggatggttccttcaccaaagaatgattttgac
tgggaaggagatttacctctgcggcttcctcaaaaagatctcataatctatgaaatgcat
gtccgtggtttcacaaaacatgattccagcgaggcgaatttcccaggaacctaccgtggt
atggtggagaaacttgaccacctagaggaactcggaatcaacgcaatagagcttatgcct
tgtcatgaattcaatgagctggagtactacagctataatcctgtcttggatgatcataag
gtgaatttctggggttactcaacagttaattttttctctccaatgatgcgatattcatca
tctggtatgcaaaactgtggccgtgatgcaataaatgaattcaagcttcttgttagagaa
gctcataaacgaggcattgaggtcattatggatgttgttttcaaccacacagctgaagga
aatgagaaaggtcctactttttcgttcagaggccttgatagctgtgtctactacatgctg
gcgccaaagggtgaattttataactattctggctgtggcaacaccgtcaattgcaaccat
cctgttgtccgccaatttatagtggattgtttgagatactgggtaactgaaatgcatgtt
gacgggttccggtttgatcttgcatctatcatgaccagatcatgcagtttatgggatgca
gccaatgcctttgggagcccaatagaaggccactctataacaactggcactccattgagc
aatcctcctttgattgatttgatcagtaatgatcctgttctcaatggaatcaagcttatt
gcggaagcatgggatgcagggggtctttaccaagttggaggttttcctcatcatggtgtg
tggtcagagtggaacggccagtaccgtgacatagtccgccagtttatcaagggcacagat
ggactctctggggtttttgctgaatgtctttgtggaagccctcagttataccagggagga
ggaagaaaaccatggaacagtatcaactttatatgtgcacatgatggcttgacattgtca
gatctggtgtcatacaatgagaaacataactcagccaacggtgaagggaataacgatggt
gaggatcataataacagctggaattgtggacaggaaggagaatttgcaagtttacctgta
cagcgcttgaggaagagacaaatgcgaaactttttcctttgtctcatggtgtcacaaggc
acacccatgatattcatgggggacgaatatggacataccaagggagggaacaacaatact
tactgccatgatagctatataaactatttccgatgggacaagaaagaagacgcatcatct
gatttcttcagattctgccgcctcatgacaaaatttcgccgtgagtgtgaatctcttggt
ttggatgattttccaactggagagaggctgcaatggcatggccactcacctggggtgcct
gactggtctgagtccagccgctttgttgcgttctcactgatgggttccatcgagggagag
atttatgtggccttcaataccagccatttaccagtgaccatcgagcttcctgagcgacct
ggttatcgatgggagccccttgtcgacaccagcaagccttctccatatgactttctctct
gcagatctgccagatagaaccacagccatacagcaatatgaccatttcttgaactccaac
atatatcccttgctttcctactcgtcaatcattctcacacttgccccagatgacaattca
tga
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