Amborella trichopoda: 18440881
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Entry
18440881 CDS
T02990
Name
(RefSeq) long chain acyl-CoA synthetase 6, peroxisomal isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
atr
Amborella trichopoda
Pathway
atr00061
Fatty acid biosynthesis
atr00071
Fatty acid degradation
atr01100
Metabolic pathways
atr01212
Fatty acid metabolism
atr04146
Peroxisome
Module
atr_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
18440881
00071 Fatty acid degradation
18440881
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
18440881
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
atr01004
]
18440881
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
atr04147
]
18440881
Enzymes [BR:
atr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
18440881
Lipid biosynthesis proteins [BR:
atr01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
18440881
Exosome [BR:
atr04147
]
Exosomal proteins
Exosomal proteins of breast milk
18440881
Exosomal proteins of breast cancer cells
18440881
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
18440881
NCBI-ProteinID:
XP_006851081
UniProt:
W1PRN3
LinkDB
All DBs
Position
Unknown
AA seq
696 aa
AA seq
DB search
MDSTALRRLEAIRGHLHSHVSDPQTLLTTNQTDGEFVSGQGYSVVLPEKLQTGKWNVYRS
ARSPLKLVGRFPDHPDIGTLHDNFMHATKSFQDFKYLGSRIRVDGTVGDYKWMTYGEAET
ARTAVGSGLRHHEILKGARIGLYFINRPEWIIVDHACSAYSFVSVPLYDTLGPDAVNYIV
NHAGVEAIFCLPQTLNILMSFLSEIPSVRLIVVVGGVDENIPSLPSTTGVQIISYLKLVQ
QGGCNIQPFEPPKPEDVATICYTSGTTGTPKGAVLTHGNLIANVAGSALAVRFSPSDVHI
SYLPLAHIYERCNQIMMVYYGVAVGFYQGDNLKLMDDMAALRPTLFCSVPRLYNRIYAGI
LNAVRTSGGLRERLFNAAFNAKKQAIMNGKNPSPMWDKLVFNKIKEKLGGRVWFMGSGAS
PLSADVMDFLRVCFGGRITEGYGMTETSCVISSMDDGDCLSGHVGSPNPACEVKLVDVPE
MNYTSDDKPYPRGEVCVRGPIVFRGYYKDEAQTKEVIDKEGWLHTGDIGSWIDGGRLKII
DRKKNIFKLAQGEYIAPEKIENVYAKCKFVGQCFVYGDSLNSSLVAVVAVELDVLKAWAA
SAGIKYEDVRQLCRDPGARAAVLADMDATGREAQLRGFEFVKAVTLVPEPFTFENGLLTP
TLKVKRPQAKAYFAKVISDMYAELSKVESSPQKASL
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggattccaccgcactgagacgtctggaggcaatccgtgggcatctgcattctcatgtc
tccgatccacaaacgcttctcacgaccaaccaaactgacggagaatttgtttccgggcag
ggctatagtgtggttcttcctgaaaaactgcaaacaggaaagtggaatgtctacagatca
gcacgatccccattgaaacttgtgggaagatttccagatcatcctgatattggaactttg
catgataattttatgcatgcgaccaaaagttttcaggatttcaaatatctgggttcaaga
atacgtgtcgatggaacagttggcgattacaaatggatgacgtatggagaagcagaaact
gcacgcacagctgtagggtctgggttgagacatcatgagatattaaagggagcacgtatt
ggactgtactttatcaacaggcccgagtggattattgtcgatcatgcttgctccgcatat
tctttcgtctctgttcctttatatgatactcttggtccagatgctgttaactatattgtt
aaccatgctggtgtagaagctatcttttgcctgccccaaacgttgaatattttaatgagc
ttcttgtcagagattccttctgttcgtcttatcgtggtggttggaggagtagatgaaaac
attccttcactcccttcaacaacaggggttcagatcatctcatacttaaaattagtccaa
cagggtggctgtaatattcagccctttgagcctccaaaacctgaagatgttgcaaccatc
tgctacacaagtggtacgacgggtacaccaaagggagctgtattaactcatggaaacttg
atcgcaaatgttgccggttcagctcttgctgttagattttctccctcagatgttcacatt
tcttatcttccgcttgctcacatttatgaaaggtgcaaccagattatgatggtgtactat
ggagttgctgttggcttctaccaaggggataatttaaaattgatggatgacatggctgca
ttgagaccaacacttttttgcagtgtgcccagactttataatagaatttatgctggaatt
ttgaatgccgtgaggacatctgggggcctgcgggagaggctttttaatgctgccttcaat
gctaagaaacaggcaataatgaatgggaagaacccatcacccatgtgggataaattggtt
tttaataaaattaaggaaaaacttggaggccgtgtctggttcatgggttcaggtgcctca
cctttgtctgctgatgtcatggatttcttgagagtgtgcttcgggggtcgaataactgaa
ggttacggaatgactgagacttcatgtgttattagttcaatggatgatggtgactgttta
tctggtcatgttgggtctcccaatcctgcctgtgaagtgaaacttgtggatgttcctgaa
atgaactatacatctgatgataaaccttatcctcggggggaagtctgtgtcaggggtccc
attgtcttccgaggttactacaaagatgaagcgcaaacgaaggaggtcatcgacaaggaa
ggttggctgcacactggagatatagggtcatggatagatggtgggcgtctaaagattata
gataggaagaagaatatttttaaattggcacaaggagagtacattgctcccgaaaagatt
gagaatgtctatgctaagtgcaagtttgttggccagtgttttgtttatggtgatagcctt
aactccagtttggtggcagtagtggcagtggagcttgatgttcttaaggcttgggctgct
tctgcaggaatcaagtatgaagatgtgagacaattatgccgtgatcccggagcaagggca
gctgtgttagctgacatggatgccactggaagagaagctcagttgagaggctttgagttt
gtgaaagcggttaccttggtgcctgaaccattcacttttgagaatgggctcctaacccca
acacttaaggttaagaggccacaagctaaggcttattttgcgaaggtcatatccgacatg
tatgctgagctttccaaggtggagtcatcacctcaaaaagcttccctttaa
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