Amborella trichopoda: 18440926
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Entry
18440926 CDS
T02990
Name
(RefSeq) LOW QUALITY PROTEIN: polygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
atr
Amborella trichopoda
Pathway
atr00040
Pentose and glucuronate interconversions
atr01100
Metabolic pathways
Module
atr_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
18440926
Enzymes [BR:
atr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
18440926
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-GeneID:
18440926
NCBI-ProteinID:
XP_020527172
LinkDB
All DBs
Position
Unknown
AA seq
286 aa
AA seq
DB search
MAAVDGNSSSAGELNVIGLKVLQALGAAWKAACGWKRPSRLVIPEGTFLVGPVLFKVIEI
QFHYKRGNKGHTLVDSKLCHMLLFGCKNMSVQSIKISAPADSPNTDGIHIGSCSNXSRSH
IGTRDDCISLGPGSTQVTVKKVFCGPGHGNSVGSLGKFPKEEDVQGLHVENCTISDNTND
LKIKTWAGSASSSASKFTYEDIVMNNVANPIIIDQQYCPYTSCSQKGPSRVKIIDISFKD
IRGTSTSKIAVNLLCSEAFPCKMLRLKASNWSTMDKGKLRQPRVPM
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgtagatggcaactcttcttcagctggagagctcaatgtgattggcttgaaa
gttttgcaggctctcggtgcagcatggaaggcagcatgcggatggaaacgtccatcacgc
cttgtaatccccgagggaacgttcctcgtcggtccagtcctattcaaagtcattgaaatt
caatttcattacaaacgaggcaataaggggcatacattagtggatagcaagctctgtcac
atgctattgtttggctgcaagaatatgagtgtccaatccatcaaaatctcagcgccggcc
gacagccctaacactgatggcatccatatcggatcatgttccaacnnatcacgatctcac
attggaactagggacgattgcatctcccttgggcctggcagcacccaagtgactgtgaaa
aaggtgttttgtggaccaggacatggcaatagtgttggaagtttgggcaagttccctaag
gaggaggatgtgcaagggcttcatgtggagaattgcaccatctcagacaacaccaatgat
ctgaagatcaagacttgggcaggctcagccagtagctctgcctccaaattcacatatgag
gacattgtgatgaacaatgtcgccaaccccatcatcatagatcagcaatattgcccttat
acttcttgctcacaaaagggtccctctcgagtcaaaatcatcgacataagtttcaaggac
atcagaggaacctctacttctaaaattgcagtaaatctcttgtgcagtgaggcattcccg
tgcaaaatgttaaggttgaaggcatcaaattggagtacaatggacaaggggaagcttcga
cagcctcgtgtaccaatgtga
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