Amborella trichopoda: 18441319
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Entry
18441319 CDS
T02990
Name
(RefSeq) transcription initiation factor TFIID subunit 12 isoform X2
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
atr
Amborella trichopoda
Pathway
atr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
18441319
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atr03021
]
18441319
03036 Chromosome and associated proteins [BR:
atr03036
]
18441319
Transcription machinery [BR:
atr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
18441319
Coactivators
SAGA/TFTC/STAGA complex
18441319
Chromosome and associated proteins [BR:
atr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
18441319
STAGA complex
18441319
TFTC complex
18441319
SAGA complex
18441319
SLIK complex
18441319
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIID_20kDa
Histone
DUF5814
Motif
Other DBs
NCBI-GeneID:
18441319
NCBI-ProteinID:
XP_006851500
LinkDB
All DBs
Position
Unknown
AA seq
532 aa
AA seq
DB search
MEPEATPPQPPSSSSPSSTEPPLPSSNPNPTQIQIQSQIHSQTQAQIQIQSQTQQPQTSN
ISLNPPPNLAASDNPQQRPALPLNSKRQPPSFPPFPQHVSANSGGPLGGPLPRGGLMALG
VPAHRPPPPVGALMPSGSFGPASSSFGHHSQSQQVGLQRGAVVGQGPGPSGGPSEQGSGL
NSQGRQPLNFSITNSLGSGSQFRPGNVAMHHQQRPPVTSIRSITSSHNQSLSPQKFQGPN
MSRGPSMGSGSSQSPAAPQGSHSHQQSMQWMTTQGKQMLPPPSIPSPSYRPQMKPQSLQQ
RSQHPQQNQQSTPHQQNLPPPHHYSPQIPAPEHFTQQYQQSRMQHQQPAPRSLASTQKPS
TPIALQGGGAQAGSLSQMGVSEVVETSNHILSKRSIQELVAQIDASEKLDPELEDILVEI
AEDFLESTVTSACSLAKHRNSTKLEAKDIILHLERNWNMTLPGFGIDEIKSYKKPPVNDQ
HRQRLAAVKKAMLTNQAGGDANNPKSSAGQGGGSANARAQLTKVVPTGSPKP
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggagccagaagcaacaccaccccaacccccatcttcttcttcgccctcttcaaccgaa
ccccctcttccttcctcgaacccaaatccaacccaaattcaaatccaatcccaaatccac
tcccaaacccaagcccaaatccaaatccaatctcaaacccaacaaccccaaactagcaat
atatctctaaacccacctccaaatttagcagcctctgataatccccagcaaaggcctgct
ttgcctctaaattcaaagaggcaaccgccctctttccccccatttcctcagcatgtctct
gctaattctggcgggcctttgggcgggcctttaccgagaggagggctcatggctcttggg
gtaccagctcataggccaccacctccagttggtgctttaatgccgagtggatcttttggg
ccagcctcgtcttctttcgggcaccattcacagtctcagcaggttgggttgcagagaggt
gccgttgtgggtcagggcccgggccctagtggaggtccaagtgagcagggctctggtttg
aactctcagggaaggcagccattaaattttagcattacgaattcacttggctctggatca
cagtttagacctggaaatgtggccatgcaccatcaacagaggccacctgtgacatcaata
agatcaataacttcttcacataaccaatctttgtccccccagaagttccagggtccgaac
atgtcaagaggcccatcaatgggctcaggcagttctcaatcccccgcagctccccagggt
tctcattcccatcaacaatcaatgcaatggatgacaactcaaggaaaacaaatgctccca
cctccttctataccctctccatcttatcgtccacaaatgaagccccaaagcttgcaacaa
aggtcccaacaccctcaacaaaaccaacagtccacaccccaccaacaaaatctgccacca
cctcaccactattccccacaaatacctgcaccagagcacttcactcaacagtatcagcaa
tcaagaatgcaacatcaacagcctgcaccaagatcactggcatcgactcaaaagccttca
acacccatagcattgcaaggaggaggggcccaagctggttcactttctcaaatgggtgtt
tcggaagtggtggaaacgagtaatcacatactgagcaagcggagcatacaagagttagtt
gcacagatcgatgcttctgaaaaactggatcctgaacttgaagatattcttgtggagata
gctgaggattttcttgaatctactgtcacatctgcttgttccctggcgaagcatcggaac
tcaactaaattagaagccaaggatataattttacatttagaaaggaactggaatatgaca
cttcctggatttggtatagatgagattaaaagctacaagaagccgcccgtgaatgatcag
cacaggcaacggcttgcagcagtgaagaaggcaatgttaactaatcaggcaggcggagat
gctaacaacccgaagagctctgcaggccaaggtggtggaagtgcgaatgcgagagcccag
ttgacaaaggtggttccgactggctccccaaagccatga
DBGET
integrated database retrieval system
