Amborella trichopoda: 18441347 Help Entry 18441347          CDS       T02990                                  Name (RefSeq) splicing factor 3B subunit 3   KO K12830   splicing factor 3B subunit 3 Organism atr  Amborella trichopoda Pathway atr03040   Spliceosome Brite KEGG Orthology (KO) [BR:atr00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     18441347  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:atr03021]     18441347    03041 Spliceosome [BR:atr03041]     18441347    03036 Chromosome and associated proteins [BR:atr03036]     18441347 Transcription machinery [BR:atr03021]  Eukaryotic type   RNA polymerase II system    Coactivators     SAGA/TFTC/STAGA complex      18441347 Spliceosome [BR:atr03041]  Complex A   U2 snRNP components    U2 snRNP specific factors     18441347  Complex B     18441347  Complex C    U2 SnRNP specific factors     18441347 Chromosome and associated proteins [BR:atr03036]  Eukaryotic type   Histone modification proteins    HAT complexes     STAGA complex      18441347     TFTC complex      18441347 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Beta-prop_RSE1_1st Beta-prop_RSE1_2nd CPSF_A Beta-prop_BBS7 Beta-prop_EML_2 WDR55 Beta-prop_LRRK2 Motif Other DBs NCBI-GeneID:  18441347 NCBI-ProteinID:  XP_006851528 UniProt:  W1PYG2 LinkDB All DBs Position Unknown AA seq 1214 aa AA seqDB search MYLYGLTLQQATGVVCATYGNFVGGKSQEIIVARGKVLDLLRPDDRGKLQTLLSVEVFGA IRSLVQFRLTGSQKDYIVVGSDSGRIVILEYNKEKNIFEKIHQETFGKSGCRRIVPGQYL AVDPKGRAVMIGACEKQKLVYVLNRDTSARLTISSPLEAHKSHTVVYSIAGVDCGFDNPI FAAIELDYSEADQDSTGQAASEAQKHLTFYELDLGLNHVSRRWSEPIDNGANMLVTVPGG GDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRIKSIFFFLLQ TEYGDIFKVTLEHDNDRVSELKIKYFDTIPVTTAMCLLKSGFLFAASEFGNHALYQFQGI GDGDDVEASSATIMETDEGFQPVFFQPRGLKNLIKIDQVESLMPIMDMKVINLFEEETPQ IFTLCGRGPRSSLRILRPGLAVSEMAVSQLPGVPSAVWTVKKSASDEFDAYIVVSFANAT LVLSIGETVEEVSNSGFLDTTPSLAVSLLGEDSLMQVHPGGIRHIREDGRINEWKTPGKK TIVKVGSNRSQVVIALSGGELIYFEMDETRQLMEVEKHEMTGDVACLDIAPVPEGRKRSR FLAVGSYDSTIRILSLDPDDCMQVLSMQSVSSPPESLLLLEVQASVGGEDGADRPASVFL NAGLQNGVLYRTEVDMVTGNLSDTRSRFLGLRPPKLFACMVRGRRAMLCLSSRPWLGYIH RGHFLLTPLSYETLEYAASFSSDQCAEGVVAVAGDALRVFTIERLGETFNETVVPLRYTP RKFVLHPKKKHLVIVESDQGAFTAEEREAARKECLEAAGLGENGNANADQMQENGDDEEK EDPLPDEQYGYPKAESDKWVSCIRVLDPRSGNTTCLLELQDNEAAFSVCTVNFSDKEYGT LVAVGTAKGLQFWPKRQVSVGFIHIYRFVEDGKALELLHKTQVDGVPLALCQFQGKLLAG IGPVLRLYDLGKRKLLRKCENKLFPNTIVSIHSYRDRIYVGDIQESFHYVKYRRDENQLY IFADDSVPRWLTASYHIDFDTMAGSDKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGRL NGAPNKMEEIVQFHVGDVVTCLQKASLIPGGGECIIYGTVMGSLGALLAFTSREDVDFFA HLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLAPDLQRKIADELDRTPG EILKKLEDVRNRII NT seq 3645 nt NT seq  +upstreamnt  +downstreamnt atgtacctctacggattgaccctgcaacaggccactggcgtggtttgtgcaacctatgga aacttcgtaggtggaaaatcacaagagatcattgtagcgagaggcaaagttctcgatctt cttcgacctgatgatagaggtaagctccaaactctactctcagttgaggtttttggggcc attcgatctctggttcagttccgactcaccggttcacaaaaagactacatagttgtgggc tctgattcaggtcgaatagtgatcttagagtacaacaaagagaagaatatctttgagaaa attcaccaagaaacatttgggaaatcaggttgccgaagaatcgttcctggccaatatctg gcagttgatcccaaggggcgagcggttatgattggggcttgtgaaaaacaaaagttagtc tatgttttgaatcgtgatacctcagctaggctcacaatttcatcaccccttgaagctcac aaatctcacactgtagtatactccattgctggtgttgattgtggttttgataacccaatc tttgcagctatcgagcttgattactctgaagctgatcaggactcgactggtcaagcagct agtgaggcccaaaagcacctaactttttacgagcttgatcttgggttaaaccatgtctcc cgcagatggtcggagcctattgataatggggcaaatatgctggtcaccgtaccaggaggt ggtgacggcccaagcggcgtcttagtctgcgccgaaaattttgtaatttacaagaaccag ggacatccggatgtgcgggcagttatcccaaggcgtgctgatttgcctgctgaacggggg gttttgattgtttctgctgcaacacataggataaagtctatattctttttcctcttgcaa actgagtacggtgatatattcaaggtgacattggagcatgataacgatagggtatcagag ttgaaaattaagtattttgatactattccagtcactacggcaatgtgcttgctcaagtcg gggtttttgtttgcggcttcagagtttgggaaccatgcattgtatcaatttcaggggatt ggggatggcgatgatgttgaggcttcatcggctacgatcatggagacagatgaggggttt cagcctgtgttttttcaaccacggggcctaaagaaccttattaagattgatcaggtagag agcttgatgcccattatggatatgaaggtgattaatctctttgaggaggagacaccccaa attttcaccttgtgtggtcgcggtccccgatcgtcattgcggatcctacggccgggtttg gctgtgagtgagatggccgtgtcacagctccctggtgtcccaagtgcagtgtggacagtg aagaagagtgcaagtgacgagttcgatgcttacattgtggtttctttcgcaaatgcgaca cttgttctatcaattggagagacagttgaagaagttagcaatagtgggtttctcgatact actccctctcttgctgtttcccttttgggtgaggattctttaatgcaagttcaccctggt ggcattagacacatcagggaagatggtcgaattaatgagtggaaaacaccgggaaaaaag acgattgttaaggtgggttcgaatagatctcaagtggtgattgctttgagtggtggggag ctcatttattttgagatggatgagacaaggcagcttatggaggtcgagaagcacgagatg acaggtgatgtcgcatgccttgacatcgccccggtacctgaaggaaggaaaagatcacgt tttttggcagtaggctcttatgatagcaccattcgcattctctctttagaccccgacgac tgtatgcaagtgttgagcatgcaaagtgtgtcttctccacctgagtcccttctattgctc gaggttcaagcttcagttggtggtgaagatggggccgatcgcccagctagtgttttttta aatgctggtctccaaaatggtgtgctttatcgaaccgaggttgatatggtcaccggtaac ctctcggatactcgttctcgctttttgggtcttaggcctcccaagctatttgcttgtatg gttcgaggtcggagagccatgctgtgcctttcaagtaggccatggcttggatacattcat cgtggccattttttgcttaccccactttcatatgagaccttggaatatgcagcttcattc tcttccgatcagtgtgctgaaggtgttgttgcagttgcaggggatgcattgagggtcttt acaattgaaaggttgggtgaaactttcaatgaaacagtggttcctttgaggtatacccct cgaaaatttgttctccatccaaaaaagaagcatttggttatagtggagagtgatcaaggg gctttcacagccgaggagagagaggcagcgaggaaggagtgcttagaagctgctggtcta ggggaaaatggcaatgccaatgctgatcaaatgcaagagaatggggatgatgaagagaag gaagatccacttcctgatgagcaatatgggtacccaaaggcggaatcagacaagtgggtc tcatgtattagggttctcgacccaaggtccggaaacacaacgtgtttattggaacttcag gacaatgaggcagcatttagtgtgtgcactgtgaatttcagtgacaaggagtatggaact cttgtggctgttggtacggccaagggactgcagttttggccaaaaaggcaagtttcagtg gggtttatccatatatatagatttgttgaagatggcaaggcacttgaacttttgcataaa acgcaagtggatggggttcctctagctttatgccagtttcaagggaaattactggctggt ataggtccagtgctgaggttatatgacttggggaaaaggaagttgcttcgaaagtgtgag aataagctgttcccaaataccatagtatctatccacagttaccgtgatcgtatttatgtt ggcgacatccaggagtcattccattatgtaaaataccgaagggacgagaaccaactctac attttcgcagatgattctgtccctcgatggttgaccgcatcataccacatagatttcgac acaatggcaggatctgacaagtttgggaacatctactttgtgaggttgccacaagatgtt tctgatgagattgaagaagacccaactggtggaaagatcaagtgggagcaaggaaggctt aatggggctcctaacaaaatggaagagattgttcagttccacgtgggtgatgtggtgact tgccttcaaaaggcatcactaattcctggtggtggtgagtgcatcatttatggcacagtt atggggagcctgggagctttgcttgccttcacttcgagagaagatgttgacttctttgcg cacttggagatgcatatgaggcaggaacacccccctctttgtggaagggaccatatggcc tatcgatctgcttatttccctgttaaggatgtgattgatggtgatctttgtgagcaattc ccaacgctcgccccagatttgcagaggaaaattgcagacgaactcgatagaaccccaggc gagatcctcaagaagcttgaagatgtcaggaacaggatcatctag

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