Amborella trichopoda: 18441415
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Entry
18441415 CDS
T02990
Name
(RefSeq) heat stress transcription factor A-2e
KO
K09419
heat shock transcription factor, other eukaryote
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
atr03000
]
18441415
Transcription factors [BR:
atr03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
18441415
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSF_DNA-bind
DUF7801
CC_Bre1
Motif
Other DBs
NCBI-GeneID:
18441415
NCBI-ProteinID:
XP_006851710
UniProt:
W1PT52
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All DBs
Position
Unknown
AA seq
483 aa
AA seq
DB search
MASNPGPSSSASSSHLLEQPVLSSEPLDSGGDFQEGVPAIPQPLESLQGVPIPPFLTKTY
DLVDDPLLDPVVSWSRSGESFVVWDPMEFARTVLPRHFKHNNFSSFVRQLNTYGFRKIDA
DRWEFANEGFLRGQRHLLKNIHRRRSQQMQQIGHPLGSCVEVGKFGLENEIERLRRDKNV
LMQEVVKLQQQHQMTNHRLETMNQRIQVAEQRQKQMVSFLAKSLQNPAFLAQIFQLRENQ
QVDSRGRKRRFIKHQQAGPSSSASSEETQLVKYKAESGDSPSPLASQGLLAELANDILGD
LDGQEEFDLGEAKTWDIAHVGGKDDESIALGRKPEPEPVPVFNPGLPFHDPSDMLLMGKN
VMTSPTDESSTGAKYFVSFPDHLSPKIFSELMSPADFLMKQEDLPDVGFSGSDPTSTVPV
WEDLFYYEGQELDDAAGVSNFWNVGSQQRVEGSGTNQLNESSLDDLSKQMKQLTKDHNED
TNT
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggcttccaatcctggaccttcttcaagtgcctcctcttcccatttgctcgagcaaccc
gtgctttcttctgagccattggattctggaggggactttcaggaaggggttccggccatt
cctcagcctttggaatcactgcaaggagtcccaataccaccgttcctcacaaaaacctac
gatttggttgatgatccattgctggatccagtggtgtcatggagtcgtagtggtgagagc
ttcgtggtctgggaccccatggaatttgcaaggactgttttgccaaggcatttcaagcac
aacaacttctctagcttcgttcgccagcttaatacatatggttttcgaaagattgacgca
gatcgttgggagtttgcgaatgagggttttcttcgagggcagaggcacctattgaagaac
attcacaggagaaggtctcaacaaatgcaacagattggtcaccctttggggtcttgtgtt
gaagttgggaaatttggcttggaaaatgagattgaaaggttaagaagggacaagaatgtt
ttgatgcaagaggttgtgaaacttcagcagcaacaccaaatgacaaatcaccgtctggag
accatgaatcagaggattcaagttgcagagcaaaggcagaagcaaatggtttcctttctt
gcgaagtctttgcaaaatccagctttcttggctcaaatttttcagctaagagaaaaccag
caagttgactctagggggagaaagaggcgattcatcaagcatcagcaagctggacctagt
tcctctgcctcatctgaggaaacccaacttgtgaaatacaaggctgagtcaggtgactct
ccctcacctttggcaagtcaaggcctacttgctgaattggctaatgatatattaggagat
ttggatggtcaagaagaatttgatttaggagaagcaaaaacttgggatattgctcatgta
ggagggaaagacgatgaatctattgcactggggagaaaaccagaaccagaaccagtccca
gtcttcaatcctggtcttccatttcatgatcctagtgacatgttgcttatggggaagaat
gttatgacctctccaactgatgaaagctcaactggtgccaaatactttgtatcctttcct
gatcatttgtcacctaagatattttcagaactgatgtctcctgctgatttccttatgaaa
caagaagacttaccagatgtgggttttagcggaagtgatcctacttctactgttcctgtt
tgggaagatctcttctactatgagggtcaagaactggatgatgcagctggtgtttccaat
ttttggaacgtgggttcacagcaaagagttgaaggttcgggaaccaaccaattgaatgag
tcttctttagatgatctttcaaaacaaatgaaacagcttacgaaagatcacaatgaagac
acaaatacctag
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