Amborella trichopoda: 18441557
Help
Entry
18441557 CDS
T02990
Name
(RefSeq) deoxyribodipyrimidine photo-lyase isoform X1
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atr03400
]
18441557
Enzymes [BR:
atr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
18441557
DNA repair and recombination proteins [BR:
atr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
18441557
Prokaryotic type
18441557
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_photolyase
NNH2
Motif
Other DBs
NCBI-GeneID:
18441557
NCBI-ProteinID:
XP_006851849
LinkDB
All DBs
Position
Unknown
AA seq
568 aa
AA seq
DB search
MYLCRISPLNLCYSRVLGLFIQASSLKVPLISSFCTSRLSSSSSMEPAKKSMKKRSEEGA
PSSNGRLLKKLKNKSGIGMESEPEDEETGVKVQSGRVRVLKAGETGGNGPVVYWMFRDQR
CNDNWALVYALEQGARLNVPVVVAFNLFDQFLGAKARQLGFMLRGLRDLEQSLKVLGVPF
FLFRGEADENIPKFTSQCNASLLVTDFSPLRIIQNIKENICHRVTEEIPVHEVDAHNIVP
VWVASDKLEYGARTIRTKINKLLPEYLTEFPDLKAPQIRWKDESPVEIDWENLIAEVLRK
GGAVPEVHWIEPGEQAALDMLMGSKNGFLSTRLKNYSTDRNNPSRPKGLSCLSPYLHFGQ
ISSQRCALEARKFRKLYSQSVDSFLEELIVRRELADNFCFYQPNYDSLQGAWEWARKTLR
DHAGDKREHIYTMEQLEKAKTADPLWNASQLEMVHYGKMHGFMRMYWAKKILEWTSGPEE
ALSIAIHLNDKYELDGRDPNGYVGCMWSICGIHDQGWRERSVFGKIRYMNYAGCKRKFDV
DGYIAYVKKLAAETKKRVPIKEIMEHNN
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgtatttatgccggatatcgccattaaacttgtgttattctagggttttgggattgttc
atccaagcttcatcgctaaaggttccgttaatcagctcattttgtaccagtagattgagc
tccagttcttcaatggagcctgctaaaaaatccatgaaaaaaaggtcagaagaaggggcc
ccctcaagtaatggtagattgttgaagaaactgaaaaataagagtggaataggaatggaa
tcggaacctgaagatgaagaaactggggttaaggttcaatcagggagagttagagtgctt
aaagctggagaaactgggggtaatgggcctgttgtttactggatgttcagagatcagaga
tgtaacgataattgggctttggtttatgctttggagcaaggagctagattgaatgttcca
gtggttgtggcgtttaatttgtttgatcagtttttgggggcaaaagccaggcagttaggg
tttatgctcaggggtttaagagatcttgagcagagcctgaaggttttaggcgttccattt
tttctatttcggggagaagctgatgaaaatatccctaaattcacgagccaatgcaatgca
tcccttcttgtcacagatttctcgcccttacggatcattcaaaatataaaagagaatata
tgccatagggtaaccgaagaaattccagttcatgaagtggatgctcataacatagtacca
gtgtgggtggcctctgataaattggagtatggtgcaaggactataagaaccaagatcaac
aagcttctaccagagtacctcactgaattccctgatttgaaagccccccaaattagatgg
aaggatgaatctcctgttgaaatagattgggagaacctcatcgctgaagttctgaggaaa
ggtggtgcggttcctgaagtacactggattgaacctggtgaacaagcagcattggatatg
cttatgggtagcaaaaatggcttcctttcgacaagattgaaaaattattcaaccgatcga
aacaacccatcaagacctaagggcctttcgtgcctttctccttacttgcattttggtcaa
atctcttcacagcgctgcgctttggaggctcgtaaatttcgaaaattatattcccagtca
gtagattcgtttttggaagagctcattgtacgaagagaattggctgacaatttttgtttc
taccaaccaaattatgattcattacaaggagcatgggaatgggccagaaaaaccctaagg
gatcatgctggagacaagcgggagcatatctacacgatggagcagttagaaaaagcaaaa
acggcagatcctttatggaatgcgtctcagttagagatggttcactacggaaagatgcat
ggattcatgcggatgtattgggcaaagaaaatacttgaatggacaagtggacccgaggaa
gctctttcaattgcgatacatttgaatgacaagtatgaattagatggtcgagatccaaat
ggctatgttggctgtatgtggtcaatatgcggtattcatgaccagggatggcgagaaaga
tctgtgttcgggaaaatacgttacatgaattatgctggctgtaaaaggaaattcgacgtt
gatggctacatagcttatgtgaagaaacttgcagcggagacaaagaaaagggttccaatt
aaggaaatcatggaacataacaactag
DBGET
integrated database retrieval system
