Amborella trichopoda: 18441633
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Entry
18441633 CDS
T02990
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2 isoform X2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atr03400
]
18441633
Enzymes [BR:
atr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
18441633
DNA repair and recombination proteins [BR:
atr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
18441633
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Motif
Other DBs
NCBI-GeneID:
18441633
NCBI-ProteinID:
XP_006851921
LinkDB
All DBs
Position
Unknown
AA seq
596 aa
AA seq
DB search
MRILTYNVNGLRQRVNQHGSLLNFLNSLQADIICLQETKLSRQELSADLAMAAGYESFFS
CTRTSNRGRVGYSGVATFCRVESAFSSKEVALPLAAEEGFTGLLDRSKGESVSSGAFLAN
IFEQVEELGPLSGMDLLKVDSEGRCVITDHGHFVLFNIYGPRAQSDNVERVQFKFTFFKV
LQKRWEAILNQGRTIFIVGDLNIAPSAMDCCDAGPDFEDNSFRKWLKSLLKEGGGPFYDV
FRTKHPDRKEAYTCWSPQTGAEEFNFGSRIDLILIAGPCLHQSTDSEIHDLLDCHVNECD
ILTQFKRSRQDNTPRWKGGRSIKLEGSDHVPVFVNLGDMPDLALHSTPPLATRYVPEVRG
RQQTLVSMLQKRQVLIGEENRGTYDTLSGDCALENCKEDARRSCEVAKGSLSMPYINTNM
TKKAKCRNSSQLTLKSFFKMNPAHAIIELENANADALKCEIDELINESEISEDVKETNSF
DDTPIDKDPQNITQDECYGETSCHDEGNNLVQMSEKVKDSIALSEWKRIQSLMQSSIPLC
KGHKEPCVARSVKKAGSKNIGRGFYVCARAKGPSSNPEARCDHFQWATSNIRQKQR
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgaggatcttgacatacaacgtgaatgggctaaggcaaagagtgaatcagcacggctcc
ctcctcaacttcctcaactctctgcaagcagatattatttgcctccaggaaacaaaattg
tcaagacaagaactttcggcagacttggccatggctgcgggatatgagtcctttttctct
tgcactcgtacttctaacagaggtcgtgttggttattctggtgttgcaacattttgtcgt
gttgaatcagcattttcaagcaaagaagtggctttgcctcttgcagcagaggaaggtttc
acaggtctgctggatcgttcaaaaggagagagtgtttcttcaggagctttcttggctaat
atttttgagcaggtggaggaactggggccattatcaggaatggaccttttgaaagttgac
agtgaggggcgttgtgtcatcactgatcatgggcattttgttcttttcaacatatatgga
cctcgagctcaatctgataacgtggaaagggtacagttcaagttcactttctttaaggtt
ttacagaaaagatgggaggcgatattaaatcaaggaagaacaatatttattgttggtgat
ttgaatattgcaccttctgctatggattgctgtgatgcaggaccagactttgaggataat
tcatttcggaagtggctgaaatcattgttgaaggaaggaggtggtccattttatgatgtc
ttcagaacaaagcatccagacagaaaggaggcttatacgtgctggtcaccacaaactggt
gctgaggagttcaattttgggtccaggattgatctgattctcattgctggaccttgcctt
catcaaagtacagactcagaaattcatgacttgttagattgccatgttaacgagtgtgac
attcttactcagttcaaacgttcaagacaggacaacactccaaggtggaaaggtgggaga
agcattaaattggaaggctctgatcatgttccagtctttgtcaacctgggtgatatgcct
gatcttgcattgcacagcactccacctctggcgactagatatgttcctgaggttcgtgga
cggcaacaaactctcgtttcgatgcttcagaaaaggcaagttttaattggggaggagaac
cggggaacatacgatacactatctggagattgtgcattagagaattgcaaggaggatgct
aggcgttcatgtgaggttgccaaaggttctttatcgatgccttatattaacacaaacatg
acgaaaaaagcaaagtgtagaaattcttcacaactgacattgaagtctttcttcaagatg
aatccagcacatgcaattatcgagttagagaatgcaaatgctgatgcattaaaatgtgaa
atagatgagttaataaatgaatctgaaatttctgaagatgtgaaggagaccaattcattc
gatgacacccctattgataaagatccacaaaatatcacccaggatgaatgctatggggaa
acatcatgtcatgatgaaggcaataatttagttcagatgtctgagaaggttaaagatagc
attgcattgtcagagtggaaaaggattcagagtttaatgcagagtagcataccactttgt
aagggtcataaagaaccttgtgttgctcggtcagtaaagaaagccggttcaaaaaatata
ggccgtggattctacgtttgtgctcgtgctaaggggccctcgtctaatcctgaagctcgg
tgcgatcacttccagtgggcaacctcaaatattaggcagaaacagagatga
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