Amborella trichopoda: 18441930
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Entry
18441930 CDS
T02990
Name
(RefSeq) DNA repair protein XRCC4
KO
K10886
DNA-repair protein XRCC4
Organism
atr
Amborella trichopoda
Pathway
atr03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
18441930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atr03400
]
18441930
DNA repair and recombination proteins [BR:
atr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
18441930
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XRCC4
XRCC4_CC
XLF
Flu_M2
Motif
Other DBs
NCBI-GeneID:
18441930
NCBI-ProteinID:
XP_006852217
UniProt:
W1PZT8
LinkDB
All DBs
Position
Unknown
AA seq
235 aa
AA seq
DB search
MEDSIKHSCMRLDLGSKDGVFYIMGTWLPSRFSLSITDGLRTWTCNASEEEVENRANQWD
QLVSEYLETAEHYLGFQQPGSVYAFTPAGDENRRLSWAYEKQGTKLEWRWKCEKSSDDKK
VTASILDFLMEANTRLSDEVVRNTRSFERMKVEAEKCLAQSERFNIDKAEFESAAYAKFV
AVLNSKKMKLRDLRDRLSKTEHPHPGKLAQDEDDSSEKTQAFNGESDKSENSKAP
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atggaagactccataaagcattcatgtatgagactggaccttggcagcaaagacggcgtc
ttttacatcatggggacatggcttccttcccgtttcagcctttcaataacagacggcctt
cggacctggacctgcaatgcttcagaggaggaagtggaaaatagggcgaaccagtgggat
caattggtgtccgaatatcttgaaacagctgagcattacctggggtttcaacaacctggt
tcggtttatgcttttactccagctggtgatgaaaacaggaggctgtcatgggcatatgag
aagcaaggaactaagctagaatggcgttggaagtgtgaaaagtcatcagatgataagaaa
gtcactgcatcaatactggacttccttatggaggcaaacacaagattaagtgatgaagtt
gttagaaataccagatcatttgaaagaatgaaagttgaggctgaaaaatgtttggcacag
agtgagaggttcaacattgataaggctgaatttgaatctgctgcatatgcaaagtttgtt
gcagttctgaactctaaaaaaatgaagcttcgggatctccgagaccgactttctaaaact
gaacacccacaccctggcaaacttgctcaagatgaggatgactctagtgagaagactcag
gccttcaatggagaaagtgataagtcagagaacagcaaagcgccatag
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