KEGG   Amborella trichopoda: 18442026
Entry
18442026          CDS       T02990                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 38
  KO
K18655  ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7]
Organism
atr  Amborella trichopoda
Pathway
atr03013  Nucleocytoplasmic transport
atr03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:atr00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    18442026
   03015 mRNA surveillance pathway
    18442026
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:atr03019]
    18442026
Enzymes [BR:atr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     18442026
Messenger RNA biogenesis [BR:atr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     18442026
SSDB
Motif
Pfam: DEAD Helicase_C ResIII
Other DBs
NCBI-GeneID: 18442026
NCBI-ProteinID: XP_006852312
UniProt: W1PZZ2
LinkDB
Position
Unknown
AA seq 494 aa
MAEESEKVVIESEKKESAEKVAVESEKKRWGDEEADEEPEKVDIGSLTLAGKNAIDDPHE
SEIEVKTGDSLYTSAKTFEELNLSKELLKGLYVAMGFSRPSRIQAVSLPMIVTPPYKSLV
AQAHNGSGKTTCFVLGMLSRVDPNHKVPQALCVCPTRELAIQNREVLLRMGKYTGITSMC
AVPTDKNSFITTSRMEAVTEQVVIGTPGTLKGWIAKRKLSTRYIKILVFDEADQMLAEEG
FKDDSLRIMKAIEGNKSNSDPNCQVLLFSATFNETVKDFASRIVKDGNHMFVKKEELALD
TIKQYKVQVPDELAKLEVLKNKIFLLAQKLGQTIIFVNTRQSASILHRTLEKEGWDCTSI
QGALELDARDRIVNEFKSGLTKVLISTDVLARGFDQAQVNLVVNFDLPIKYQHPDPQNPR
QRRRTEPDYEAYIHRIGRAGRFGRKGAVFNFMSGHDDAELMEKIEKHFQHKIKEISSWES
EELFEAALKEAGLA
NT seq 1485 nt   +upstreamnt  +downstreamnt
atggcagaggaatctgagaaggtggttattgaaagcgaaaagaaggagagtgcagagaag
gtggctgttgaaagcgaaaagaagagatggggtgatgaagaagctgatgaagaaccagaa
aaagttgatatcggttctctaactcttgctggaaagaatgccattgatgatccacatgaa
tctgaaatagaggttaaaacaggtgattctttgtacacctcagcaaaaacttttgaggag
ttgaatctttcgaaagagctactcaaaggtttatatgtagcaatgggtttcagtcgcccc
agtcgaatacaggctgtaagccttccaatgatcgttacaccaccatataagagcttagta
gcacaagcccacaatggttctggaaagaccacttgttttgtgcttggcatgttgagtcga
gtcgacccaaatcacaaagtccctcaagcactatgtgtatgccccacaagagaactagct
attcagaaccgggaggtgcttttaaggatggggaaatacactggtataacgagtatgtgc
gcagttcctactgacaagaatagttttattacaacttcaagaatggaggcggtaactgaa
caagttgtgattgggactcctggaactttgaaagggtggatagcaaaaagaaagttaagc
actcgatatataaagattcttgtatttgacgaggctgatcagatgttagctgaggaggga
tttaaggatgattctctgaggatcatgaaagctattgaaggaaataaatccaattcagat
cctaactgtcaggtccttttattctctgcaacatttaatgaaactgtgaaagattttgca
tcaagaattgtaaaggatggcaatcatatgtttgttaagaaagaagagcttgctttggat
actataaaacagtataaagttcaggtcccggatgagcttgccaagttagaggtgttgaag
aacaagatctttttgttggctcaaaagttgggtcagacaattatttttgttaatacgagg
caaagtgcgagcatcttgcatcgtacactagagaaagaaggatgggattgcacatcaatt
caaggtgcacttgaactagatgccagggatcgcattgtcaacgagttcaagtctggattg
acgaaagttctcatatctactgatgtattggctcgtggttttgatcaagcccaggtgaat
ctggtggtgaattttgatctccctatcaaatatcagcatcccgatcctcagaatcctcgt
caaagaagaagaactgaacctgattacgaagcatatatacataggattggtcgagctggc
cgttttggtcggaaaggagctgtttttaactttatgagcggacatgatgatgctgaactg
atggagaaaatagaaaaacatttccagcacaaaataaaagagatttcatcgtgggagagt
gaggaactttttgaggctgctctcaaagaggctggtctagcgtag

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