Amborella trichopoda: 18442062
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Entry
18442062 CDS
T02990
Name
(RefSeq) protein gamma response 1
KO
K13096
splicing factor 4
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atr03041
]
18442062
Spliceosome [BR:
atr03041
]
Complex A
Other components
Complex A specific factors
18442062
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GFIT
Motif
Pfam:
SAE2
Motif
Other DBs
NCBI-GeneID:
18442062
NCBI-ProteinID:
XP_006852348
UniProt:
W1Q0X1
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Position
Unknown
AA seq
627 aa
AA seq
DB search
MDNDSGNAIPTDCSFEEGTPKYLTGLSTIMVASIQELKDRISQIEFIFCRQIFPTYQSEL
KTSRGLQKLLVKDKKDAENEWREKERSLLLLIEDLRNEKQQAQELIQQEKAKLLAKFDTE
KEELLKAHEGEKHALFTRLDKLENIGEVEELQRQLQLKIEELTKLRAKHDLLMTDLKCKE
GLAKEWLENFLRVDKEAQEQIQKEKEKLGKLFLNKKEKWIKTEKSQLLGRLEKLENGGEL
SQLREKLCLKEVEVIQLKKMNQKLAEDLKSNDNEQRIIDMHLDNCRDQLKSTKEISEGKL
INERREKACVIQEFELLKKKYISLHSQHKFLRGKLGLSLDKRHNMNVGRESSIHPRQENL
PDDAGQNPSTAPLSPQLDKPEKNGDAEIEPKTCMEPKKIRTPETAPGFNSEKISPVAPTE
SSSSRALKRPFISKIESHSGLKRSNSSWRDTRACQELKEKGDPHDDFLDTPMEMVHMNLN
KEPTNGLEPKTERGGAQLIAVPPLNDMDFDNSDEDETQEFDSNSSKELKACEDPKLEPKK
NSSTSTRELNRGYKYVEPVRKKEEREALKGAECNQCKKFYDAILPNGNSDIVRCEHRDVG
SRHRYRYAPPSTPEGFWNIGFDSVMEN
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggacaatgattcaggaaatgccataccaactgactgttcctttgaagaaggcactcca
aaatacctcactgggctcagcacaattatggtggcctcaattcaagaactaaaagaccga
atctctcagatagagttcattttctgccgccaaatctttcctacctatcaatctgaactg
aaaacatcaagaggcttgcaaaaactgcttgtcaaagataagaaagatgcagaaaatgag
tggagagagaaagagcgctctttgttactgttaattgaagaccttcgcaatgaaaaacaa
caggcccaagaattgattcaacaggagaaagcaaagttgttggcaaagtttgatacagaa
aaggaagaattgctgaaagctcatgaaggggagaaacatgcactttttacaagattggac
aaattagagaacattggagaggttgaggagcttcagagacagctacagttaaaaatagag
gaactcaccaaattaagagcaaagcatgacctactaatgactgaccttaaatgtaaagaa
ggacttgctaaagagtggctagaaaattttttgagagtagataaggaggcccaagaacaa
attcagaaagagaaagagaagttgggaaaacttttccttaataagaaggaaaagtggata
aaaactgagaaatctcagctcttaggtaggttggaaaagctagaaaatggtggggagctt
tctcagcttcgagaaaagctttgcctgaaagaagtggaagtcatccaattaaaaaaaatg
aaccaaaagttagcagaggacctcaaatctaacgataatgagcaaaggataattgacatg
cacctggataattgcagagatcagctaaagagtaccaaagagatatcagaggggaagctg
ataaatgaaaggagagagaaggcatgtgtaattcaggaattcgagcttctgaaaaagaag
tacatcagcctacactcacagcataaatttcttcgtggcaaacttggtctttcattggac
aagaggcacaatatgaatgtagggagagaatcatctattcatcctcggcaggaaaactta
ccagatgatgcaggtcagaacccaagtaccgctcctctctctcctcaattggacaaacct
gaaaagaacggcgatgcagaaatagaaccaaaaacctgtatggaaccaaaaaaaattaga
accccagaaacagcaccaggcttcaattctgaaaaaatatcacctgttgcccctacagaa
agctctagttccagagctctaaaacgccccttcatttcaaagattgaatctcactctggc
ctaaagcgctcaaactcctcttggagggatactcgggcctgccaagaattaaaggaaaag
ggagacccacatgatgattttcttgataccccaatggaaatggttcatatgaacttgaat
aaagagcctactaatgggcttgaacctaaaacagagagaggaggagctcaattaattgca
gttccgcccctgaatgacatggatttcgataattctgatgaggatgagacccaggaattt
gactcgaattcttcaaaggaattaaaagcttgtgaagacccaaaattggaacccaaaaag
aacagttcaacaagtacaagagaattgaacagaggctataagtatgttgaaccggtcagg
aagaaagaagaaagagaagctcttaaaggggctgagtgcaaccagtgtaagaagttttat
gatgccattcttccaaatggtaatagtgatattgtacgatgtgaacatagagatgtgggt
tcgaggcatcgttatcgctatgctcctccttcaactcctgaaggattttggaatatcggg
tttgattcagttatggaaaattag
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