Amborella trichopoda: 18442088
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Entry
18442088 CDS
T02990
Name
(RefSeq) uncharacterized protein LOC18442088
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
atr03016
]
18442088
Enzymes [BR:
atr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
18442088
Transfer RNA biogenesis [BR:
atr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
18442088
Prokaryotic type
18442088
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-GeneID:
18442088
NCBI-ProteinID:
XP_006852373
UniProt:
W1Q0X6
LinkDB
All DBs
Position
Unknown
AA seq
519 aa
AA seq
DB search
MAITLNPIQGHIRQPKMAFPFRLKTLSHFSSIPKSLFLRSFSFSISRTPYPLQYDLISYK
PVNPSSGRSKTQKPKSFENFPEKETGPSLGEPHHLYLASKSKRKYYKKRRKRMYGSETDD
EGSRDDEYVELKPEVVEMPTYHAREEELYFHDAFAFPWEKDKHYRMVYQLEKKFFPGQGM
DQAFVDPNKTSTNQNQEKVKRENGLLGKSKNKKKNEIFEVGHGDKGISDDLDKKLVFFEE
SGDFKKDSKSGGKVDVTEKKVEEFFKCLKKVPNAGESLIGEPYFLSRTSELPPRWDGPFG
TVVLIDKPKGWTSFTVCGKLRRLVKVQKVGHAGTLDPMATGLLIVFIGKATKQVERYQDM
IKVYSGIFRLGEATSTWDAESPVIQREPWEHIKDEDIRKAVASFSGEIWQVPPMFSAIKV
GGEKLYEKARRGETMELSPRRISIFEFDIERSLDDRQNLIFKVTCSKGTYIRSLCADLGR
ALGSCAHLIALRRDQIGQYSADNAWNFDELQDQITKNYL
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggcgataaccctaaatccaattcaaggtcacattcgacaaccgaaaatggcgttcccc
ttcagacttaaaactctctctcacttttcttctattccgaaatccctattcctcagaagc
ttctcattctccatttctcgtaccccttatccccttcaatacgatctcatatcttataaa
ccagttaatccttcatctgggcgtagcaaaacccaaaaaccaaaatcctttgaaaacttt
ccagaaaaggaaactggtccaagcttaggagaaccccatcacttgtaccttgcaagcaaa
agcaagagaaaatattacaagaaaaggagaaaaaggatgtatggctctgaaactgatgac
gaaggatcaagggatgatgagtatgtcgaattgaaaccagaggttgtggaaatgcccact
tatcatgctagagaagaggaattgtactttcatgatgcatttgcttttccatgggagaag
gataaacattataggatggtttatcagttagagaagaaattttttccaggtcagggtatg
gaccaggcatttgttgatccaaataagacatcaacaaatcagaaccaagagaaggtgaag
agagagaatgggttgttgggcaagtccaagaataagaagaaaaatgagatttttgaagtg
ggtcatggagataaggggatttcagatgatttagacaagaagttggtgtttttcgaagag
agtggtgatttcaagaaggattccaagagtgggggaaaggtggatgttacagagaagaaa
gtagaggagttcttcaagtgtttgaagaaggtgcctaatgctggagagtctttgattggg
gagccatattttttgagtaggacctcagagttgcctcctagatgggatggcccttttggc
acggtggtcttgattgataaacccaaaggatggacttcatttactgtttgtggaaagttg
aggcgcctggtcaaagttcagaaggttggtcatgctggtactcttgatcctatggcaact
ggtttactgattgtttttattggaaaggcaacaaagcaggtagaaagatatcaggacatg
ataaaggtttatagtggtattttccgattgggggaagctacatcaacttgggatgcagag
tcaccggtcatccaacgagagccatgggagcatatcaaagatgaggatattaggaaggct
gtagcatctttcagtggggagatatggcaagttcccccaatgttctctgcgataaaagtt
ggaggtgaaaagctgtacgaaaaagcaaggagaggagaaacaatggaactttcccctaga
agaatttcaatttttgagtttgacattgaacgtagcttggatgacagacaaaatttaatc
ttcaaagtcacctgctcaaaagggacatacattcgatcactatgtgcagacctgggaagg
gccttggggagttgtgctcatttgatcgcccttcgaagagatcaaattggacaatattca
gcagataatgcgtggaatttcgacgaactacaagaccagataaccaagaactacttgtga
DBGET
integrated database retrieval system
