KEGG   Amborella trichopoda: 18442343
Entry
18442343          CDS       T02990                                 
Name
(RefSeq) lysine-specific demethylase JMJ25 isoform X3
  KO
K15601  [histone H3]-dimethyl-L-lysine9 demethylase [EC:1.14.11.65]
Organism
atr  Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:atr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:atr03036]
    18442343
Enzymes [BR:atr01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.65  [histone H3]-dimethyl-L-lysine9 demethylase
     18442343
Chromosome and associated proteins [BR:atr03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    18442343
SSDB
Motif
Pfam: JmjC WRC zf-4CXXC_R1 Cupin_2 Cupin_8
Other DBs
NCBI-GeneID: 18442343
NCBI-ProteinID: XP_011626304
LinkDB
Position
Unknown
AA seq 1249 aa
MFREEWKMNCGGLVLEGNLLPLPQAWRNKESKIHRSWFFSSMEVPQCKRSDGKGWRCSAM
AFGGRTYCERHWLMQKKTRDRKLNSKIGNGENEKKSIKRKKSSDEKENGFHKRKKVKREK
KRESEDGVSDNYSDEGSVGLIDERERECRLSKGLGSVGLVDERERECRLLKGLSGKKQKE
VRSLYGKNPKAGTGFEKKKLDSGLSTEKKKRVSGLSSEKKKVVRVNSGEVGCKVYGALDR
DDELKREDGTCKNKEKKGLMCHQCLHSYKDGVVVCSYCEKKRYCYTCVTKWYPEQTREEI
ENACPYCRGNCNCKACLRESIAVMANRKEVDASVKLRRLQYLLRRVLPVLEKIYAEQDLE
KEIEAKIRGVQPADLDVERSKLNPDERIYCNNCNTSIVDFHRSCSNPKCDYDLCLSCCRE
LREGRQPGGNKAETAHQQSIERTQNRVSDDSSKDVNSKPCIPRKRYGWESQAAAANGHIV
MPPSLPLPDWKANEDGNIPCPPKVRGGCGAYTLTLKRNFKTNWVVKLFNNAKELIDSNDE
LSKDSGFSQRCLRCPPYWHSEIIGDDNKKCDLRLAAHRGDSDDFLYCPSALDVGSDGIDH
FQEHWIRGEPVIVRDVNERTSGLSWEPMVMWRAVRETSRKKLQEEKTTVKAIDCLDWCEV
EINIHKFFKGYLEGRMHRGGWPEMLKLKDWPSSSRFEERLPRHGAEFIASLPYFDYTHPN
LGLLNLATKLPDGCLKPDLGPKTYIAYGSYEELGRGDSVTKLHCDMSDAVNVLTHTKEVK
FASWQRKRIRQMQHRHEEEDEIELYGGADKAVDNAAEEKVDNSDIGRGQTANKGSLSPKC
GDKVDRNFPLPEKMDLEIVPEKLDQKMSIYTKISDDHESEMTQGCSKSEGSEENLPLSVK
IDNDRQWLGGSEKLDPKMDLETKFSDANLSAMRVEFSKCVESNVENLVLLRKMDIGPERL
DGSEELGQNDTESEMREGCSEWKNRIEEQSPLSEEMDIYPVRLGHQQIEMKASSSTRNDS
EVVEPQRSHSLSPAEVHSFEVTPDKDADNAEGTSGVSEEDRAEASKSSGEALVNGFVHQD
DVSDVVYGGAVWDIFRRQDVPKLIEYLEKHWKEFRHISNLPVNSVIHPIHDQTLYLNEKH
KKQLKEEFNIEPWTFEQHFGEAVFIPAGCPHQVRNRKSCIKVALDFVSPDNVEECVRLTE
EFRLLPKSHRAKEDKLEVKKMVLYSVSAAVREARQLITELKDKDNKVKI
NT seq 3750 nt   +upstreamnt  +downstreamnt
atgtttcgagaagaatggaaaatgaactgcggtggcttggttttagaaggaaatctctta
cccctgccccaagcatggagaaataaagagagcaaaatccacagaagctggtttttttct
tcaatggaggttcctcaatgcaagaggtcagatggcaagggatggagatgcagcgccatg
gcctttggaggccgaacgtactgtgaaaggcactggttgatgcagaaaaaaactagagac
agaaaattgaactccaaaattgggaatggagaaaatgagaagaagtcaattaagaggaag
aagagctctgatgagaaagaaaatgggtttcacaaaaggaaaaaggtgaagagggagaag
aagagggaatcagaggatggggtctctgataattattctgacgaggggtctgtgggtttg
attgatgagagagaaagagaatgccggttatcgaaggggttagggtctgtgggtttggtt
gatgagagagaaagagaatgtcggttattgaaggggttatctggaaagaaacagaaggag
gtgcgcagcctgtatgggaagaacccaaaagcgggtactggattcgagaagaagaagctg
gattctgggttatcaactgagaagaagaagagagtttctgggttatcaagtgagaagaag
aaggtcgttcgtgtgaactctggcgaggttggttgcaaggtttatggagcactggacaga
gatgatgaattaaagagagaggatggtacctgtaagaataaggagaagaaaggtctaatg
tgccaccagtgtctgcatagttacaaagatggtgtcgttgtttgctcgtactgtgaaaag
aagcgctattgttacacatgtgtaaccaaatggtatcctgaacaaacacgggaagaaatt
gaaaatgcttgtccatattgtcgtggcaattgcaattgtaaggcgtgtttgcgtgaaagc
attgctgtgatggccaatagaaaggaagttgatgccagtgttaaactgcgacgattgcag
tatctgttacgtcgggtccttcctgtgctggagaaaatttatgcagagcaggatttggag
aaagagatagaagctaagataaggggagttcagccagctgatctggatgtggaaaggtca
aaacttaaccctgatgaacgtatatattgcaacaactgtaatacgtcgatcgtcgatttc
catagaagctgctcaaacccgaaatgtgattatgatctttgtctttcatgttgccgggaa
ctccgtgaaggtcgtcagccaggaggcaacaaggctgaaactgcccaccaacaatcaata
gaaagaacccaaaatcgggtatcggatgactcttccaaagatgttaatagcaaaccatgc
atacccagaaaaagatatggttgggagagtcaagcggctgctgctaatggccatattgtg
atgcccccttctcttcctttgcctgattggaaagcaaatgaagatggtaacatcccttgc
cccccaaaagtgcggggcggatgtggggcttacaccctcacgctaaagcgcaacttcaaa
acgaattgggttgtcaagttatttaacaatgccaaggaactcattgatagtaatgatgaa
ttgtctaaggattcggggttttctcaaagatgtcttcgttgccctccatattggcattca
gagattattggtgatgataataaaaagtgtgaccttaggctggcggctcatcgaggtgac
agtgatgacttcctctattgtccaagtgcccttgatgtggggagcgatgggattgaccat
tttcaggagcactggataagaggcgagccagtgatagttagggatgttaatgagagaaca
tctggacttagttgggaacccatggttatgtggagggctgttcgggagacatccagaaag
aagctccaagaggagaaaacaactgtaaaggccattgattgcttggattggtgtgaggtt
gagattaatattcacaaatttttcaaaggctacttagagggtcgcatgcatagaggtggt
tggccagagatgttgaagctgaaggattggccttcatccagccgatttgaagaacggttg
cctagacatggtgctgagttcattgcatcattaccttatttcgattatactcatccaaat
ttgggtcttctgaatctagccacaaagcttcctgacggttgcctaaagccagatttagga
cccaagacatacattgcatatggatcctatgaagagcttggtaggggtgactcggtaaca
aagttgcattgtgatatgtctgatgcggttaatgttctaacccatacaaaggaggtgaag
tttgcatcgtggcaacggaagagaattagacaaatgcaacataggcatgaagaggaagat
gagattgaactgtatggtggggcagacaaggctgtggataacgctgctgaggaaaaggtg
gacaactcagatataggtaggggccaaacagcgaataaaggatctctctctccaaaatgt
ggtgataaagtcgacagaaacttcccattgccagagaagatggacttagagattgtacca
gaaaaactagatcaaaaaatgagtatctatacaaaaatttcagatgaccatgaatctgag
atgacacaaggctgttcaaaatctgaaggtagtgaagaaaatttaccattgtcagtaaag
atagataatgatcgacagtggttaggtggctcagaaaaattagatccaaaaatggatctt
gagacaaaattttcagatgcaaatctatctgcgatgagagttgaattttcaaagtgtgtg
gaaagtaatgtggaaaatttggtattgttgagaaagatggacattggcccagagagattg
gatgggtctgaagaattaggtcagaatgacactgaatctgagatgagagaaggttgttca
gaatggaagaacaggattgaggaacaatcaccattgtcagaagagatggacatttatcca
gtgagattaggtcatcaacaaattgagatgaaggcatcctctagtacaaggaacgattcc
gaagttgtagagccacagagatctcacagcctttcgccagctgaagttcattcttttgaa
gtaacaccagataaggatgctgataatgcggaaggcacatcaggcgtttcggaagaggat
agggctgaggcttctaaatccagtggagaagctttagtgaatggctttgttcaccaagat
gatgtttcagatgttgtttatggaggcgctgtttgggatattttccggaggcaggacgtt
ccaaagttaatagaatatctcgaaaagcattggaaggaatttcgccatatcagcaatctt
cctgtgaactcggttattcatcctattcatgaccagacactttacttgaatgaaaagcac
aagaaacagcttaaagaggagtttaatattgaaccttggacttttgagcaacactttggt
gaagcggtatttattccagctggttgtccccatcaagtgaggaatagaaagtcatgcatt
aaagtggctctggactttgtatctcctgacaatgtcgaagaatgtgttcgattgacagaa
gagtttcggttgcttccaaaaagccatagggccaaggaagataaattagaggtgaagaag
atggttttatacagtgtgagtgcagctgttagagaagctcgacagttgatcacagaactc
aaggacaaggacaataaagtcaagatttaa

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