Amborella trichopoda: 18442350
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Entry
18442350 CDS
T02990
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT3
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
atr
Amborella trichopoda
Pathway
atr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
18442350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atr04121
]
18442350
Enzymes [BR:
atr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
18442350
Ubiquitin system [BR:
atr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
18442350
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
zf-C3HC4_3
zf-Di19
DUF7567
Motif
Other DBs
NCBI-GeneID:
18442350
NCBI-ProteinID:
XP_006852631
LinkDB
All DBs
Position
Unknown
AA seq
303 aa
AA seq
DB search
MDLDNIECISSSDGVDEDEPAFSKTHVPSPPATSVHELLECPVCTNSMYPPIHQCSNGHT
LCSTCKARVHNRCPTCRQELGDIRCLALEKVAESLELPCRNYIHGCPGIFPYYSKLKHEV
QCSFRPYTCPYAGSECSVTGDIPTLVAHLRDDHKVDMHSGATFNHRYVKSNPREVENATW
MLTVFHCYGQYFCLHFEAFLLGMAPVYMAFLRFMGDDNEARNFTYSLEVGANGRKLIWEG
VPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQQNTDPGACIPN
LCS
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggacttggataatatagagtgcatctcctcatcagatggggtcgatgaagatgagccc
gctttctccaagacccatgtcccctcacctcctgcaacaagtgtacacgagctcttggaa
tgccctgtttgtaccaattctatgtaccctcctattcatcagtgtagcaatggacacacg
ctttgttccacgtgtaaagctagagtgcacaaccgatgtcccacatgccggcaagagcta
ggggacatcaggtgcttggctttagagaaggtggccgagtctctggagctcccttgcagg
aactacattcatgggtgcccaggcatattcccttattacagcaagctcaagcatgaggta
cagtgtagcttcaggccttatacctgcccttatgcaggctctgagtgctcggtcacgggg
gatatacctacccttgttgctcatctgagggatgaccacaaggtggacatgcactctggt
gcaactttcaaccatcgctatgtgaagtccaatccccgagaggttgagaatgcgacatgg
atgctcactgtattccactgttatggtcagtacttctgtctacactttgaggcctttctg
cttgggatggcacctgtgtacatggccttcctccgcttcatgggagatgacaatgaggcc
agaaacttcacctatagccttgaggtaggggccaatggccgcaagctcatatgggaaggg
gtccctcgaagcattcgtgatagccatcgaaaggttcgagatagccatgatggcctcata
atccaaagaaacatggctctgttcttttcaggaggtgatcgtaaagagctcaagctaagg
gtcacaggtcggatttggaaggaacaacaaaatacagaccctggtgcatgcatacccaac
ttgtgtagctga
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integrated database retrieval system
