Amborella trichopoda: 18442424
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Entry
18442424 CDS
T02990
Name
(RefSeq) glycogen synthase isoform X4
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
atr
Amborella trichopoda
Pathway
atr00500
Starch and sucrose metabolism
atr01100
Metabolic pathways
atr01110
Biosynthesis of secondary metabolites
Module
atr_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
18442424
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
atr01003
]
18442424
Enzymes [BR:
atr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
18442424
Glycosyltransferases [BR:
atr01003
]
Polysaccharide
Storage polysaccharide
18442424
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_5
Glyco_transf_4
Glyco_trans_4_4
Motif
Other DBs
NCBI-GeneID:
18442424
NCBI-ProteinID:
XP_011626366
UniProt:
U5CYG4
LinkDB
All DBs
Position
Unknown
AA seq
699 aa
AA seq
DB search
MEALATVAHPASSTRFFPNTDTVKRPLKSPAVCCSRNSEDANNFLPGSSHTKSKGNGIDA
VQTSMVSPDIELGVNHNDIWLLFNEAQQNILYLNKQRLMAMEKLNKIQKEKELLLSRIKQ
LESEKMSGTLDGTTTVPKEKTKPKGDKPVIFGELLLRIDSMVLSGAISHGEASDLRSMVM
EDKAMLADAFHDLHKNDGELLVCLRRFYDQSRRTGLHIVQICTELEPVASVGSLATYVTG
LSRALQRKGNTVEVILPKYAILNLEQVHGFRKAEAEFHSYFSGQWHPNRIWTGIVHGIAV
TFIEPIHLAAFFSREGIYGYSDDLERFTYFSRAALDYIVKSKKKPDIFHIHGWQTSVIGP
LFWDFFVNQGLETTRLLLTCHGFDSQCVERPEKLALCGLDPPQLHRSDRLQDNSGNHLVN
LLKGGVVYSNKVAIVSSLHSKDAVIESMSYGLETTLAIHREKVLVIPYGFDDTKWDPSKD
NFLPVNYSSEDPKGKATCRTALRQRLRFVDQTSAAMVGCIYTEVSEIDVENLKAVVCLAL
GKGAQFIFLGSSTTPEVEAALESLRKELKDQNVRFINKYNEALSHLVIAGSDILLCASFH
DPKLHLPLKAIKYGTIPVAVNPNESRLVRHAEGQEFGSTKSSRILSMFANVSLSQALDDM
KYDGIGWSKKIKDAMSEDLSWDSECCDMYMDAYMSMKNL
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggaggctctggcaacagtagctcaccctgcttcttctactcgtttctttcccaacact
gacactgtcaagaggcctcttaaatctcctgcagtttgttgttccaggaatagtgaagat
gctaacaactttcttcctggatcttcacatacaaagtcaaagggcaatggcatagatgca
gttcagacatcaatggtttccccagatatagaattgggagtaaatcataacgatatctgg
ctgctcttcaatgaagctcaacaaaatattctatacctaaataaacagcgtcttatggca
atggagaagcttaacaaaattcagaaggaaaaagagttgttgctttctagaataaaacag
ctggagtcagaaaagatgtctggcacgcttgatggtacgactacggtcccaaaggaaaaa
accaagccaaaaggggacaagccagtcatttttggtgagctgctcttgcgaattgattca
atggtcctttctggtgctattagccatggggaggcatctgatctgagaagtatggtcatg
gaagataaagccatgctggcagatgcttttcatgacttgcataaaaatgatggcgagctg
ctcgtatgtcttcggcggttttatgatcaaagcaggcgaacgggtttgcacattgtacaa
atatgcactgaattagaaccagttgcttcagttggatctttggcaacttatgtgacaggc
ttgtctcgtgcactgcagagaaaaggcaatacggtggaggttattttacccaaatatgca
atactaaatttggaacaagtacatggattcaggaaagcagaagctgaatttcattcttat
ttctctggccagtggcatccaaacaggatctggactggtattgtccacggcattgcagtg
acgttcattgaacctatacaccttgctgcatttttttccagagaaggtatatatggctac
tctgatgaccttgagcgattcacctatttctctcgcgctgcgctggattatatagtgaaa
tcgaaaaagaaaccagacatttttcacatacatggttggcaaacatctgtcattgggcca
cttttttgggacttctttgtcaatcagggattggaaactacaagattgttgttgacatgc
catggttttgattctcagtgtgttgagcggcctgaaaaattagcattgtgtggattagat
cctcctcagctgcatcgttcagatagattgcaagataatagtggcaatcatctcgtcaat
cttttgaagggtggagttgtatactctaataaggtggccattgtttcgtctctccattca
aaagatgctgtaattgaaagcatgtcttatggcttagaaactacattagcaatacatagg
gagaaagtgttggttatcccttatggatttgatgacacaaaatgggatccttcaaaagac
aatttccttccagtgaactactcatcagaagatcccaaagggaaggctacttgcaggacc
gcacttaggcaacgccttagatttgtggaccaaacatctgctgcaatggttgggtgcata
tatacagaagtttcggaaatagatgtggaaaatctgaaagcagttgtttgtcttgcattg
ggaaagggagctcagttcatctttttgggatctagtacaacaccagaggtagaagctgca
cttgaatcacttcgtaaagaactcaaggaccaaaatgtgagatttataaacaaatacaac
gaggccttgtcacacttggtaattgcaggctcagatatcctcttgtgtgcttcatttcat
gatcccaagctgcatttacctctcaaggcaatcaagtatggcaccattcctgtggcagta
aatcccaatgaaagcagattagtaagacatgctgaggggcaggagtttgggagcacaaag
tcttcgcgcatcctatcaatgtttgcaaacgtgtctttgagccaagccctagatgatatg
aagtatgacggtatcggttggagcaagaagatcaaggatgccatgtcagaagacttatcg
tgggattctgaatgctgtgacatgtatatggatgcctatatgtccatgaaaaacctatga
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