Amborella trichopoda: 18442432
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Entry
18442432 CDS
T02990
Name
(RefSeq) probable sphingolipid transporter spinster homolog 2 isoform X1
KO
K23677
MFS transporter, Spinster family, sphingosine-1-phosphate transporter
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
atr02000
]
18442432
Transporters [BR:
atr02000
]
Major facilitator superfamily (MFS)
Lipid transporters
Sphingosine-1-phosphate transporter (Spinster) family [TC:
2.A.1.49
]
18442432
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Ortholog
Paralog
GFIT
Motif
Pfam:
MFS_1
OATP
Sugar_tr
MFS_4
MFS_3
Motif
Other DBs
NCBI-GeneID:
18442432
NCBI-ProteinID:
XP_006852711
UniProt:
U5D1E4
LinkDB
All DBs
Position
Unknown
AA seq
533 aa
AA seq
DB search
MVPLNTEVVAGSGPATSTDATTDATTAAAMDEDSKPSWFTPKRLLIIFCIINMLNYVDRG
AIASNGVNGSRVTCTESGICTGGSGIQGDFKLSYFEDGVLSSAFMVGLLVASPIFASLAK
TLNPFRLIGVGLSVWTVATAGCGFSFNFWSIAIFRMLVGVGEASFISLAAPFIDDNAPAA
QKTAWLSVFYMCIPTGIALGYVYGGLVGDHFSWRVAFWGEALLMVPFAILGFLIKPLKLR
GFASSKTRKSAIRVQIDASEVKDNQVLEGADNLLKGSELNDDISKKHSISEGKPKVRNQF
LRFWDDMKVLLCDVVYITNVLGYISYNFVIGAYSYWGPKAGYDIYHMANADLMFGAITII
CGIFGTLAGGYILDRMQATISNAFKLLSGATFLGAIFCFTAFLSTKLYGFIVLFSIGELL
IFATQGPVNYVCLHCVKPSMRPISMAMSTVSIHIFGDVPSSPLVGILQDHVNNWRETALI
LTSILFLAAGIWCIGIFVPSVDRSNEVEEDKEGSIAVGVSNRTPLLDGSQARV
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggtgccgcttaatactgaggtggttgcaggttcgggcccagcaacaagcacggacgcg
accacggacgccaccactgctgcggccatggacgaggattccaagccctcctggttcacc
cccaaaaggttgcttataattttttgcataataaacatgctaaactatgttgatcgagga
gccatagcaagcaatggtgtgaatgggagcagagtaacatgcactgaaagtggcatatgc
actggtgggagtggaattcagggtgactttaaattaagctattttgaagatggagtacta
tcttctgcttttatggttgggcttctagtggcttctccgatcttcgcatctttagctaaa
acgcttaatccattcaggctgattggggttggcttgtccgtttggactgtggctactgct
ggttgtggtttttcattcaatttttggtctattgcaatttttcgtatgttggttggtgtt
ggtgaggcatccttcataagtcttgccgctccattcattgatgacaatgctcctgcagct
cagaaaacggcatggctttcagtcttttacatgtgtataccaactggaattgcgcttggc
tatgtgtatgggggtttggttggagatcattttagttggcgtgtagcattttggggagag
gcacttcttatggttccttttgctattcttgggttcctgataaagcctttgaaattgaga
ggttttgcttcttcaaaaacaagaaagtcagcaattagggtacagattgatgcttcagaa
gttaaagacaaccaggttctagagggcgcagataatctgctgaagggaagcgagttaaat
gatgatatctcgaagaaacactccatatctgaaggaaaaccaaaggttaggaatcaattc
ttaaggttttgggatgatatgaaagtgcttctgtgtgatgttgtttatatcacaaatgtt
ctaggctatatatcatacaactttgttattggagcttattcttattgggggccgaaagct
ggttatgatatctaccatatggctaatgcagatttaatgtttggagcaattacaattatt
tgtggaatatttggaacattagctggtggctatattcttgatcgaatgcaagctactatc
tccaatgcgttcaagcttctttctggagcaactttcttgggagctatattttgcttcact
gcgttcttgtcaacgaaactgtatggttttattgtgctcttctcaattggtgaactgctt
atttttgctacacagggccctgtaaattatgtatgtctccactgcgtaaaaccaagcatg
cggccaatatcaatggcaatgtctactgtttcaattcatatatttggtgatgtgccatcc
tctccacttgtcggcattcttcaggatcatgtgaacaactggcgagagactgctctcata
ctgacatctattctattcctggcggctggcatttggtgcataggtatttttgtgcctagt
gtggatagatcaaatgaagtggaagaggataaagaaggcagcattgcagttggggtatct
aaccgaacacccttgcttgatggatcacaagcacgagtgtaa
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