Amborella trichopoda: 18442444
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Entry
18442444 CDS
T02990
Name
(RefSeq) lariat debranching enzyme isoform X2
KO
K18328
lariat debranching enzyme [EC:3.1.-.-]
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atr03041
]
18442444
03009 Ribosome biogenesis [BR:
atr03009
]
18442444
Spliceosome [BR:
atr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
18442444
Ribosome biogenesis [BR:
atr03009
]
Eukaryotic type
90S particles
RNase
18442444
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DBR1
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-GeneID:
18442444
NCBI-ProteinID:
XP_011626370
LinkDB
All DBs
Position
Unknown
AA seq
415 aa
AA seq
DB search
MKIAIEGCMHGELDNVYSTLLYIEKVENTKIDLLICCGDFQAIRNKDDLKSVNVKPKYWD
NCMNSFWKYYSGKETAPIPTIFVGGNHEASNYLWELYYGGWTAPNIYFLGFAGVVKFGDI
RIGGLSGIYKARDYYSGHYERTPYNSNDIRSIYHVRQYDVYKLMQIEEKIDIFISHDWPL
GITDHGSCKELIQQKPFFEREIRERSLGSKPAAELLEKLKPAYWFSGHLHCKFPAIVQHG
EDGPITKFLALDKCLPGRKFLQIIEIESNPGPFEIHYDEEWLAITLKYNPLLPLTRKSAQ
LGGEEPGLQGYRERVKNQLMARGSKPFEFSPTVPAHDPESFSGDPSFQGHIRNPQIESFL
QLLGLPYLLDSNQESDAFLRSSSSLEFRGQNDQAFDNDGDDDDVDDIEALAGGEF
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgcaatcgaaggttgtatgcatggtgaacttgataatgtctactcaactcta
ttgtatatcgagaaagtggagaacacaaagattgacttgcttatatgctgtggagacttt
caggccattaggaataaggatgatctaaaaagcgtaaatgtcaaacccaagtattgggac
aactgtatgaacagcttctggaaatattactctggaaaagaaacagctcctattccaact
atttttgttggtggaaatcacgaggcatcaaattatctgtgggaactgtattatggagga
tggacggcacctaacatatatttcttgggctttgctggagtggtcaaatttggagacatt
cgtattgggggactctctgggatatataaggcacgtgattactattcaggacattatgag
aggactccttataatagcaatgacattcggtctatatatcatgtgcgtcagtatgatgtt
tataagctcatgcaaattgaggagaaaattgatatatttatttcacatgattggcctctt
ggcatcactgatcacgggagctgtaaggagcttattcaacagaagcctttttttgagaga
gagattagggagagaagtcttggaagtaagcccgcagcagagttgctagagaaactgaaa
ccggcatattggttctctggtcatttgcattgcaaatttccagctattgttcaacatggg
gaggatggtcccatcacaaaattccttgcgctggataagtgtctcccaggacgcaaattt
ttgcagatcattgaaattgaatccaatcctggacctttcgaaattcattatgacgaagaa
tggctcgcaataacactgaagtacaatcctttgcttcctctgacaagaaagtctgctcaa
ctggggggtgaagagccaggtctccaaggttaccgagaaagggtcaagaaccagctaatg
gctagaggatcaaaaccttttgaattttcacctacggttccagcacatgatcctgaatca
ttttcgggtgacccttcttttcaaggacacattcggaatccacaaatagaatcctttctg
cagttattgggacttccatatcttcttgatagcaatcaagaatctgatgcttttctccgt
agttcctcatccttggagtttagaggtcaaaatgatcaagcttttgataatgatggtgat
gacgatgatgtcgatgacattgaagcccttgcaggaggtgaattttga
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