Amborella trichopoda: 18442473
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Entry
18442473 CDS
T02990
Name
(RefSeq) RNA-binding KH domain-containing protein RCF3 isoform X1
KO
K21444
poly(rC)-binding protein 3/4
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atr03019
]
18442473
Messenger RNA biogenesis [BR:
atr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
18442473
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_Vigilin
KH_5
TFB6
Motif
Other DBs
NCBI-GeneID:
18442473
NCBI-ProteinID:
XP_006852751
UniProt:
U5D1I1
LinkDB
All DBs
Position
Unknown
AA seq
696 aa
AA seq
DB search
MSFPLTPSKRPYEWHNEPNGRDRWHNTVQNSHSKTPSDFTVFRVLCLASKSGSVIGKGGT
IVNHIQQATGAKVRVEDTVPGCDERVVVITGSEKDREAGKEPGKEDEEGENVANDDNDVK
SNDEDKDDKESDEPLDAQSQQAMSSAQKALLLVFERTVEGEHEIEQEDDTDSKSSPIVFR
FLVPSVQVGCILGKGGNVIKQISAESGAQIRILHNDKLPACAWSSEEVVQITGGLDSVRK
ALQAVSQQLQENPPRDRDPFPPNKPSGPPPHLFGSNSHSDLLPPSNYHFSGQGGPYPPVR
GDDGGYLSGAPPPIPKFYDGFNSSRMKSTPEILTFKLLCMNEKVGGVIGKGGSIIRALQN
ETGAEIKILDSVPDSEDRVIVISAPTHPDDRISAAQDAVLRVQSRIFKAAPDSKEKNLVC
KVLVHSNQIGCLLGKGGAIIAEMRKSSRAHIRILAKDQIPKCASDNEEVVQVTGEFEAVQ
EALLQITSRLRQHLFRDRFQSIINHPHHPAFIEQVPPPVPPYMGRRPPSPPGMYSHMGPS
IHKFDLPPNMDHPGFPHGIQKPGFPHSSERMPPPAPWAHQGIGGSGSGSGSGRETGLPDY
DRGFTQRRPDGVGSQSAIITSTTVEVVVPRAVVPTIYGENGECLKKIRQISGANITITEP
RHGAKETAVIISGTPEQTNAAQSLLQAFVLSGQGSP
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcccgttgactccctccaagagaccctacgagtggcataatgagccaaatgga
agggacagatggcataacactgtgcagaactctcattcaaaaactccttcagattttact
gttttccgtgttctttgccttgcttctaaatctggaagtgtgattggtaaaggtggaacc
attgttaatcatatacaacaagcaactggtgcaaaagttagggttgaggatactgtccct
gggtgtgatgagagagttgttgtaataactggttcagaaaaagatagagaagcaggcaaa
gagcctggcaaagaagacgaggaaggtgaaaatgttgctaatgatgacaatgatgtgaag
agtaatgatgaagataaagacgataaagaatctgatgaaccccttgatgcgcaatctcaa
caggctatgtcgtcagcacaaaaggcgttattacttgtttttgagagaacggtagaagga
gagcatgagattgaacaggaagatgatacggattctaagtcatctccaattgtcttcaga
ttcctagtgccgtcagtccaggttggctgtattctggggaaagggggaaatgtgataaaa
caaatttcagcagagagtggagcacagattcgtattcttcataatgacaagcttcctgct
tgtgcttggtcttctgaagaagtggtgcagattactgggggattagactctgtaaggaaa
gctcttcaagctgtttctcagcagcttcaggagaacccgcctcgtgatcgtgatccattt
cccccaaacaagccttcaggaccaccccctcatttgtttggttcaaattctcactcagat
ctcttacctccctcaaactatcatttctctggtcaagggggtccatacccccctgtgcgg
ggtgatgacggtggctatctatcgggtgctcctccaccaatccctaaattttatgatggt
tttaactccagtagaatgaaatcaacccctgaaatacttacatttaaattgttatgtatg
aatgagaaggttggaggtgtgataggaaaagggggttccataattagagcactccaaaat
gagactggggctgagatcaaaattcttgacagtgtacctgactcagaggatcgtgtaata
gtcatatcagcaccaacgcatccagacgatagaatttctgctgcacaggatgctgttctt
cgcgtgcagagcaggatttttaaagcagcacctgacagtaaagaaaaaaacttggtctgt
aaggttctggtacattccaatcagataggttgcttacttgggaagggtggtgccataata
gcagaaatgcgcaagtcatctagggcacacattcgtatattggctaaggaccagatccca
aaatgtgcttcggataatgaagaagtcgttcaggtaactggagaatttgaggctgttcaa
gaagctctattgcagatcacatccagattgcgccaacatcttttccgcgatagattccaa
tcgattatcaaccatccacatcatcctgctttcatagaacaagtaccacctccagtacct
ccatatatgggaaggagacctccttcacctcctgggatgtattcccatatgggtccttca
atccacaagtttgatcttcctcccaacatggatcatcctggctttccacatggaattcag
aagccaggattccctcacagttctgaaagaatgccacctccagcaccatgggcacatcag
ggtattggtgggagtgggagtgggagtggcagtgggcgtgagactggcctacctgattat
gacagggggtttactcaacggagaccagatggcgtaggaagtcaatcagcgattatcact
agcacaactgtagaagttgttgttcctcgagctgttgttcccacaatttatggagagaat
ggagaatgcctgaaaaaaatacgtcagatttcaggtgctaatattaccatcacagaaccc
agacatggggccaaggagactgcggtcataatttctggaacacctgagcaaacaaatgca
gcacagagtcttcttcaggcatttgtcttgagtgggcagggatctccttga
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