Amborella trichopoda: 18442487
Help
Entry
18442487 CDS
T02990
Name
(RefSeq) aspartate--tRNA ligase, chloroplastic/mitochondrial isoform X1
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
atr
Amborella trichopoda
Pathway
atr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
18442487
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
atr01007
]
18442487
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
atr03016
]
18442487
03029 Mitochondrial biogenesis [BR:
atr03029
]
18442487
Enzymes [BR:
atr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
18442487
Amino acid related enzymes [BR:
atr01007
]
Aminoacyl-tRNA synthetase
Class II (A)
18442487
Transfer RNA biogenesis [BR:
atr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
18442487
Prokaryotic type
Other AARSs
18442487
Mitochondrial biogenesis [BR:
atr03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
18442487
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
DUF4443
Motif
Other DBs
NCBI-GeneID:
18442487
NCBI-ProteinID:
XP_006852765
UniProt:
U5CYL0
LinkDB
All DBs
Position
Unknown
AA seq
671 aa
AA seq
DB search
MLPRRLHWESMSAILRALPTVKISSINNKTTILQLPSHPVYRSLSSQARTFRSISALSSS
ANSIAQELKPTLPTVDSLEWVTRTDFCGELTDADVGKRVRLCGWVALHRIHGAVTFLNLR
DHTGIVQITTLPDEFPDAHALANKLRLEYVIAVEGVVRSRPSESVNRKMSTGGLEIAAES
INLLNSVRSALPFLVTVADDAKDIVTEEIRLRYRCLDLRRQQMHSNLKLRHKVIKVIRQY
LEDVLGFVEIETPLLSRSTPEGARDYLVPSRVQPGTFYALPQSPQLFKQMLMVSGFDKYY
QIARCFRDEDLRADRQPEFTQLDMELAFTPLEDMLNLNENLIRHVFQEIKGIQLPKPFPR
ITYDEAMSCYGSDKPDLRFDMKLRDVGYLFLECSFKVFADCLACGGLVKSLCVPCGAIKY
SNTSLKKGEVYSEAIKSGAKGLPFLKVLDGGELEGIPALVSSLDHAAKEKLVKLCSANSG
DLILFAVGSQAAVNKTLDRLRTFVAHDLEMVDHSLHSILWVTDFPMFEWNSSEQRFEALH
HPFTAPNPKDLDDLSTASALAYDLVYNGVEVGGGSLRIYKREIQEKVLEFVGISPIQAKE
KFGYLLEALDMGAPPHGGIAYGLDRLVMLLAGASSIRDVIAFPKTTTAQCALTKAPSEVD
PQQLVDLSFPS
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgctccctaggcgtctgcactgggagagcatgtctgccattctccgagctctccccacc
gttaaaatctcctccattaacaacaaaaccactattttgcaactcccctctcaccccgtt
tatcgttctctctcctctcaagcaagaacatttcgttccatttcagctttgagttcctca
gcaaattctattgctcaagagctaaaaccaacattgcccaccgttgattctcttgaatgg
gtgacccgaactgatttttgtggagagctaactgatgcggatgttggtaagagggttcgt
ctttgcgggtgggttgcgctccatcgaattcatggcgctgtgactttccttaacttgaga
gatcacactggcattgttcagattactactctgcctgatgagttccctgatgcccatgct
ttggcaaataagctgagactggagtacgtaattgcagtggaaggtgttgttcgttctcgg
ccctctgaatcggtgaacagaaagatgagtactggtggattggagattgcagcagagtct
ataaatctattgaattctgttcggtcagccttgccatttttagttactgttgctgatgat
gcaaaagatatagtcacagaggaaattcgcctaagataccgatgccttgatttgcgccga
cagcagatgcattccaacctaaagttgcggcataaagttattaaggtcatcaggcaatac
ctagaggatgtacttggctttgtggagattgaaactcctttactatccagatccacaccc
gaaggtgctcgggattatcttgtgccctcacgagttcagccagggacattctatgcttta
cctcagagccctcagttgttcaagcaaatgttaatggtttctggctttgacaagtactat
caaatagcaaggtgttttcgagatgaggacctgagggcagatagacagccagagtttacc
cagctagatatggaattggcttttacacctttagaggacatgctgaatctcaatgaaaat
ttaataagacatgtatttcaagaaattaaaggaatccaacttccaaaaccttttccacgt
atcacatatgatgaagctatgagctgttatggatcagacaagccagatcttcgctttgac
atgaagctgagagatgtgggatatttatttttggagtgctctttcaaagtttttgctgat
tgcttggcatgtggggggcttgtaaagtcattatgcgttccttgtggtgcaattaaatac
tcaaacacaagcttaaaaaagggggaggtctacagtgaagcaattaaatctggagctaag
ggtttaccttttctcaaggttttggatggtggagagctcgaggggattcctgctttggta
tcgagcctggatcatgcagccaaagagaaattagtgaaactttgctctgcaaactctgga
gatttgattttgtttgctgtgggttctcaggcagcagtgaataagacacttgaccggcta
agaacatttgtagcccatgatctagagatggttgaccattcattgcactcaatattgtgg
gtaacggactttcctatgtttgagtggaacagctctgagcagagatttgaggccctgcac
cacccttttactgcaccaaaccccaaggatttggatgatctctctactgctagtgctttg
gcttatgatttggtctacaatggagtcgaggtcggaggtgggagcttgaggatctataaa
agggagattcaagaaaaggttttggaatttgttggcatttctcctatacaggccaaagaa
aagtttggctatcttttagaggctttggacatgggggctccaccgcatggagggattgct
tatggattagatagactcgttatgctcttggctggtgcaagttccataagagatgttatt
gcattccctaagaccacaactgcccaatgtgctctcacaaaggcaccttccgaagttgat
ccccaacagttggtagatctttcttttccctcttaa
DBGET
integrated database retrieval system
